man1a1 (man1a1,LOC102782693)


Basic Information

Item Value
gene id man1a1
gene name man1a1,LOC102782693
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 28001397 ~ 28162620 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781595.1
ttgtacgGTTAGTAGAACACATAAAGCTGTAACCGCGGCTGTCAACAGCTTTTATACTAAGCCGTTGGGAGGACACGCCCCCCGTGTTCCCACCACTCACAGGGCAGAAAGTGATTAGCTCATCGCGGCTGTCAGTCACGCCTATCTACCGTTGCTTCCTGTGTGAGCCACTGGACTCGTCTGACTGCACAGAGTCTCCGGTATGGGCAGCCGTCTAGTCTTCAACTTTTTACTGGAGATTTTACCACAGTTACTGTACATTTGACACGGTTTATAACATCTGAAAATGGATTTCTGATCGGAATAACCCGAAAGTGAGTCCGAGTGAGTTCATTCGACCGTTtaaattcatatttttgttcGAGTTGTTGAAGGAAGACGGGAAAATGCCAGTTGCAACTCTTCTGCCTTTTACCGCGACCCCGAATAGGAAGTCTGCCAGCCCGACCTCATTCAGGTTGACAGAgaaatttattttgttattagtGTTTAGCGCTTTTATAACCCTCTGTTTCGGGGCCATTTTCTTCCTGCCGGACTCGTCCAAGCTGCTTAGCGGAGTTTTCTTTCATTCCTCCGCGGTGGAGACCAACACCCGCACCGGTCCGGACAGCAGCGACCCAGGTTCGGCAGTAAACGAGGAGAGGGTCCTGGCCAAAATCAGGAAAGACCACGAAAAAGCTCTGTTAGAGGCAAAGGATATCCTACAAAAACGGCCCGACGAgataaaacaagacattaaaaaggagaaggagaaagttCCAATGGAGAGTATGGGTCAAGGTGGGAAGGATGACAATAATTTACCTATCGTTGAGTATCACCGCCCGCCCGGGGCGACTGGACGCGAACCTCTGGACCCCGAAACCAAGGATAGACGGGCTAAAATCAAAGAGATGATGAAACATGCGTGGGGCAACTACAGGCGCTACGCCTGGGGTTCCAATGAGCTCAGGCCCGTCTCCAAGCAAGGCCACTCCAGCAATCTATTTGGCAGTATAAAGGGAGCGACAATAGTGGATGCTCTGGATACCCTCTACATCATGGAAATGTTTGAAGAGTTTGATGCTGCTACCGATTGGGTAGAAAAGAACCTCGACTTTAAtgtgAATGCAGAAGTGTCTGTGTTTGAGGTGAACATCCGGTTCGTTGGAGGTCTGCTGTCCGCCTACTACCTGTCTGGCAAAGAGgTGTACCGTAAAAAGGCGGTGGAGCTGGGTGAAAAGCTGCTGCCAGCCTTCAAAACGCCCACCGGCATTCCCTGGGCTCTGCTTAACCTCAAGagTGGTATTGGTAGAAACTGGCCCTGGGCCTCAGGCGGCAGCAGCATCCTGGCAGAGTACGGCACGCTGCATCTGGAGTTCATGCACCTCAGCAAACTCTCAGGGAATCCTGAGTTTGCACAGAAGGTAATGAACATCCGGAAAGTACTGAATCGCCTGGACAAACCCCAGGGGCTGTATCCCAACTACCTGAACCCCAACAGCGGCCAGTGGGGCCAACATCACGTTTCCGTGGGTGGCCTAGGTGACAGTTTCTATGAATACCTGCTCAAGGCCTGGCTGATGTCTGACAAGACTGACGAGGAGGGCAAGAGGATGTATTATGATGCCCTGCAggcaATAGAAACTAACCTGATAAGGAAGTCGAGCAGCGGGCTGACCTACATAGCGGAGTGGAAGGGGGGTCTGCTGGAGCATAAGATGGGTCACCTGACCTGTTTCGCAGGCGGTATGATCGCTCTGGGTGCTGATGGAGCGCCCAGCGAGAAGACGGGACACCAGATGGAGCAGGCCGCCGAGATCGCCCGGACGTGTCACGAGTCTTACGCCAGGACCGCTTTGAAGCTGGGACCAGAAGCGTTCCGTTTTGACGGCGGGGTGGAGGCCATCGCCACACGCCAGAACGAGAAATACTTCATCCTCCGTCCCGAGGTCATAGAGACCTACTTGTACATGTGGAGGTTCACCCACGACCCCAAATACAGGGAGTGGGGCTGGGAGGCTGTTCAGGCCTTGGAGCAGCACTGTAAAGTAGAAGGAGGCTACAGCGGCGTTCGAGATGTCTACGCTTCAACTCCCAACCACGACGACGTACAGCAAAGCTTCTACTTGGCCGAGACACTCAAGTATCTCTACCTGCTCTTCTCCAACGACGACCACCTACCGTTCGACCACTGGGTCTTCAACACCGAGGCTCACCCTCTGCCCATCATCCAGAAGGACAAAACGGACATCCCCAACGAAGTGGAGTAGTGGAGCCTTCCTGCGCTGACACCCAAATCAAGTGCGAGAACCTCTGATCCTGTACACCTGAGCCTccagctgtctgtctgaaatCACTTTGGCCATTTGGAGTCCCCAGTGGTTACAGATGCCTCTtgattgggattttttttgttttttaatggatCAAAAACACAATGCAGGCCTGTTGGCACTGAATTCTTAACTGTAGAacccagttttttttatttttttttgctttttgtcgGCGCCGACCAGAACCAACATATTTACTGCCGGATAACG

Function

symbol description
man1a1 Predicted to enable mannosyl-oligosaccharide 1,2-alpha-mannosidase activity. Predicted to be involved in N-glycan processing. Predicted to act upstream of or within carbohydrate metabolic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi membrane and endoplasmic reticulum. Orthologous to human MAN1A1 (mannosidase alpha class 1A member 1).

NR:

description
PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase IA

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016020 membrane cellular_component
GO:0005509 calcium ion binding molecular_function
GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity molecular_function

KEGG:

id description
K01230 MAN1A_C, MNS1_2; mannosyl-oligosaccharide alpha-1,2-mannosidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781595.1 True 2531 mRNA 0.52 12 28001397 28162620

Neighbor

gene id symbol gene type direction distance location
tbc1d32 tbc1d32 coding upstream 250744 27673178 ~ 27750653 (+)
selenol NA coding upstream 374410 27620131 ~ 27626987 (+)
ttc13 ttc13 coding upstream 384256 27592510 ~ 27617141 (+)
fam89a fam89a,LOC104954304 coding upstream 432127 27564976 ~ 27569270 (+)
sprtn NA coding upstream 443378 27553111 ~ 27558019 (+)
fam184ab fam184a,LOC101465847,LOC102781517 coding downstream 41010 28203630 ~ 28379848 (+)
ptrhd1 ptrhd1,LOC102782396,LOC103399259 coding downstream 219062 28381682 ~ 28383084 (+)
ncoa1 ncoa1 coding downstream 230487 28393107 ~ 28466873 (+)
rfx6 rfx6,LOC102778618,LOC102305591,LOC102193265 coding downstream 506642 28669262 ~ 28689591 (+)
vgll2a vgll2,LOC102778318 coding downstream 578548 28741168 ~ 28748192 (+)
G187872 NA non-coding upstream 20374 27884718 ~ 27981023 (+)
G187861 NA non-coding upstream 212795 27788385 ~ 27788602 (+)
G187803 NA non-coding upstream 340740 27660365 ~ 27660657 (+)
G187785 NA non-coding upstream 359024 27563182 ~ 27642373 (+)
G187779 NA non-coding upstream 425684 27532177 ~ 27575713 (+)
G187878 NA non-coding downstream 512 28163132 ~ 28166327 (+)
G187886 NA non-coding downstream 14781 28177401 ~ 28196686 (+)
G187906 NA non-coding downstream 202618 28365238 ~ 28377640 (+)
G187915 NA non-coding downstream 257372 28419992 ~ 28420262 (+)
G187918 NA non-coding downstream 309495 28472115 ~ 28545515 (+)
LOC120546215 LOC104930085 other upstream 963169 27028105 ~ 27038228 (+)
LOC120546586 dtnb other upstream 1263594 26695430 ~ 26737803 (+)
G187574 NA other upstream 1315890 26682895 ~ 26685507 (+)
tfap2b tfap2b other upstream 1549032 26438486 ~ 26452365 (+)
tfap2d tfap2d other upstream 1570000 26413691 ~ 26431397 (+)
afdna afdn,LOC102779179 other downstream 376780 28539400 ~ 28649123 (+)
ttll2 ttll2 other downstream 710066 28872686 ~ 28883121 (+)
G188063 NA other downstream 723870 28886490 ~ 28891364 (+)
trim54 trim54,LOC103375614 other downstream 948338 29110958 ~ 29132700 (+)
G188167 ucn other downstream 971551 29134171 ~ 29136917 (+)

Expression


Co-expression Network