sprtn


Basic Information

Item Value
gene id sprtn
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 27553111 ~ 27558019 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039782528.1
TTGCCAGTATTATTCAAATCTAAAGCCGGAAATGTATTTAATAAGAGCATAATTGATTACAACGATTTAAAAGCAATAGTGGATCGTACTTTGATTATTCaacatatatattaaaaaacaaaacagaaatgctTTATTTGCCACACACCCCTCCTATAAAAATGGATGGCCGCAGTTATTTTTTCCAGAAATGTTATTTTGAAATCCTTAACGGATATACTTTGGTTGCATTGTGGTGGACTTGACGCAAGTGTTGGCGTTAGCTTTGGACTGACAGTTAGCAGAAGCCTTCGTCCAACATGAAGATACAAATATTTTAATGAAATCATGACACAAATTCGAGCATTTTTACAGGTAGTATATTTGCCAGACTGTATTCTGGCACGGTGACTGTGTCACTTGTTGTTTGAGAGCCCCGTACTTACTacgttagctagttagcttcagCAAGCTAATATAAACATTGACAAGCTAACGTAGCtttttttagtgtTTCAATTGTAATGGATGAGGATTTTCTGCTCGCAATTCGGCTTCAGGAGCAGTTTGACAATGAATACGAGACATCATCATATTCGTCAAACAGCTTTGAGGACAATGGCTTCGGACAAAGCAGTAAGAAACGGAAAGTGGAGGTAGCTAGAGGTGGCAGCGATGTTGCTCCCTACTGGAAGCCGACTGTCCGGCCCGACAGGCCGCTGTCCATCGTGGACGCTTCCTGGGAGACGCTGGACCCCAGTCCCGATGTCAGAGCCATGTTTCTGGAGTTCAATGACACATTCTTCTGGGGGAAACTCAGCGGTGTCGAGGTTAAGTGGAGCCCAAGAATGACACTgtgtgctggtgtgtgttcTTATGAGGGCCGAGGTGGTCTGTGTTCAATCAGACTCAGTGAGCCTCTGCTGAAGCTTAGGCCAAGAAAAGACCTGGTGGAGACTCTCCTCCATGAAATGATTCACGCGCTGCTGTTTGTGACCCAGAACAACAGAGACCGAGACGGTCATGGCCCTGAGTTCTGCAAACACATGAACCGGATCAACAGTGCCAGTGGGACAAAAATATCTGTCTACCACAGTTTCCATGATGAGGTCGATGTGTACCGGCAGCACTGGTGGAAATGCAACGGGCCCTGTCAAAACCGCAAGCCCTATTTTGGCTTTGTGAAGAGGGCCATGAACCGGGCTCCATCTGCTCAGGATCCCTGGTGGGAGGACCACAAGAGGACATGTGGAGGGGCCTACACCAAGGTCAAGGAGCCTGAAGGATACAGCAAAAAAGGCAAGAAGGATGGTAAAAAAGATGGGAAGACCTCAGAGAAGAAGGCCTCAGAGAAGAAGGACTCAGGAAATGGAAAGCCTTCAAGTACAACTACAGGTTCTGGCTCACAGGACATAAGGAACATGATCCCATTCAGTGGCAAAGGATTCCTACTCGGGGGCACGTCGCAGTCCTCCGCGTCTTCCTCCCCATTTCACGCACCAGAAGTGCCTTCCTCTCCAAAGAAACCCTTCACCCCTTCATCTCCGGCTAAAACTCTCCATTCTCCTGTTCGCTCAGGCCTTAATAACAGAGGAATCTCTAGCGCCTTTCCCTCCGTCAGACCAGCTACCTCCATGGGCCAGAAGCAACCTACGAAGAGGTCTGTCGGTAACACGAGAGCTTTTGTCAACATCAACGGCTCGCCAGTGAGAATCCCCAAACCGCACAGCAGCAGCCGTAGCCAGGAAGCAGATAAAACCAAGCAGAAGTCCATTGAAGAGCTCTTCAACAGCTTCAGCAGGGCAGCGAGTCAGTCCTCCACCTCAGACCCAAAAACTAAAAGAGATTCACGGACATCACCGAACAGTACGACGAGCGCTGCCTCTGCGTCTTCCGTCTTTCGGAAACAGCAAAATAACCAcccagcctcctcctcctcctcctcctcctcctcctcctcctcctctcccagaaCATCTATGCCTAGTCCTAGTGAATCCAGCCATGCTGTGGTTTCAACAGGAATCAAAGGAAGCCCTGCTAAACCAACGCTCTCCAAGTATTTCGGTCATTCTAACAGTGACGGTACATCAGGAGCTGCCGGTGGGGGTCCGGTATCGAGGAAGAGGCCGTGGGACGACAGCAGCAGCTCGTCCACCATCATTGACTTCTTCCAGAAGACATTAGGCAGCGATTCAGCAGCATCGAGGGGGTCGGTGAAGACAAAATCGCCCGCAATGCAGCAAAGGACTGCAGCTGCCACCGCCTCGTCTttatcctcctcttcatcctccctcCATTCCTCTGCAGGGCTGAATAGTTTtaccccctcctcttcctcgtctTCCTCCTCGGCGCTGATGGTCAGCTGTCCTGCGTGCCAAGCAAAGGTGCAGGAGTCAAAGATCAATGAGCATCTTGATTCCTGCCTCTCCTGAATGAGGAGGAGCTGATTGTAGACCCTGACAGGGATTTGGAAATACAACCtaactttaaaaatgttcaGGGAAAGTTTGCTGTGTTGAGTTTTAGTGATTTGATCTGACGTTGGACCAGATCTCCCTTTTTAAATTTCTCAATTTTACTTTTAGATGTTGGATTTTAGGGAAATGACTCCACTTTTGATTTGAAAAGAATGGTTGGACACCGTTTTACTACCAGATTGGATTGACTACCTTACTGTAATAATGACAATTCTTCTCTCACTAGTGCCTGTCTGACAGTTTGTGCCTGAGTGTAGTAGAGAACAGCAGGGTTTAACAGATAATGTAAGTCATTCACTTTTTATGCTTAAATTAATGATGTCTTTTTCATCAGGGCAAAACACTCAAAAATTCCAGTAAATCCTGTCTGGTGGCGAGGACGAGTCTGTGTATCGTACCAGTAACTGAAGCATTCTTGTTTTAACTTTGTTGAATATTTTAAGGATGACATTAGAGCTgcaatgattaatcgattagttgtcaacttttaaattaatcggcaactattttgataatcgattagtcggtttgagtaattcttttaagacaaaagtaaaact

Function

NR:

description
PREDICTED: sprT-like domain-containing protein Spartan

GO: NA

KEGG:

id description
K24051 SPRTN; SprT-like domain-contaning protein Spartan

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039782528.1 True 3022 mRNA 0.46 6 27553111 27558019

Neighbor

gene id symbol gene type direction distance location
LOC120547108 NA coding upstream 84 27549434 ~ 27553027 (+)
c18h1orf131 NA coding upstream 75036 27473216 ~ 27478075 (+)
LOC120547023 LOC103357708,LOC100700775,LOC101482519,LOC105938917,LOC107377760 coding upstream 145752 27072970 ~ 27407359 (+)
trnat-cgu_2 NA coding upstream 571318 26981721 ~ 26981793 (+)
esco2 NA coding upstream 647868 26896380 ~ 26905243 (+)
fam89a fam89a,LOC104954304 coding downstream 6957 27564976 ~ 27569270 (+)
ttc13 ttc13 coding downstream 34491 27592510 ~ 27617141 (+)
selenol NA coding downstream 62112 27620131 ~ 27626987 (+)
tbc1d32 tbc1d32 coding downstream 115159 27673178 ~ 27750653 (+)
man1a1 man1a1,LOC102782693 coding downstream 443378 28001397 ~ 28162620 (+)
G187774 trim67,LOC102787511 non-coding upstream 23346 27529074 ~ 27529765 (+)
G187773 NA non-coding upstream 46524 27506306 ~ 27506587 (+)
G187772 NA non-coding upstream 48124 27504606 ~ 27504987 (+)
G187770 NA non-coding upstream 65689 27487164 ~ 27487422 (+)
G187738 NA non-coding upstream 156134 27396693 ~ 27396977 (+)
G187785 NA non-coding downstream 5163 27563182 ~ 27642373 (+)
G187803 NA non-coding downstream 102346 27660365 ~ 27660657 (+)
G187861 NA non-coding downstream 230366 27788385 ~ 27788602 (+)
G187872 NA non-coding downstream 326699 27884718 ~ 27981023 (+)
G187884 NA non-coding downstream 570547 28128566 ~ 28128922 (+)
LOC120546215 LOC104930085 other upstream 514883 27028105 ~ 27038228 (+)
LOC120546586 dtnb other upstream 815308 26695430 ~ 26737803 (+)
G187574 NA other upstream 867604 26682895 ~ 26685507 (+)
tfap2b tfap2b other upstream 1100746 26438486 ~ 26452365 (+)
tfap2d tfap2d other upstream 1121714 26413691 ~ 26431397 (+)
afdna afdn,LOC102779179 other downstream 981381 28539400 ~ 28649123 (+)
ttll2 ttll2 other downstream 1314667 28872686 ~ 28883121 (+)
G188063 NA other downstream 1328471 28886490 ~ 28891364 (+)
trim54 trim54,LOC103375614 other downstream 1552939 29110958 ~ 29132700 (+)
G188167 ucn other downstream 1576152 29134171 ~ 29136917 (+)

Expression


Co-expression Network