Gene
RNA
| Item | Value |
|---|---|
| gene id | G188207 |
| gene name | clvs2,LOC107675107 |
| gene type | unknown |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053129.1 |
| NCBI id | CM020926.1 |
| chromosome length | 36987114 |
| location | 29419376 ~ 29420727 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| symbol | description |
|---|---|
| clvs2 | Predicted to enable phosphatidylinositol-3,5-bisphosphate binding activity. Predicted to be involved in lysosome organization. Predicted to be located in Golgi apparatus and early endosome membrane. Predicted to be active in clathrin-coated vesicle; endosome; and trans-Golgi network. Orthologous to human CLVS2 (clavesin 2). |
| description |
|---|
| PREDICTED: clavesin-2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU254910 | True | 1352 | TUCP | 0.55 | 1 | 29419376 | 29420727 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120546480 | NA | coding | upstream | 48226 | 29315759 ~ 29371150 (+) |
| slc30a2 | slc30a3,LOC102796772 | coding | upstream | 198649 | 29196169 ~ 29220727 (+) |
| LOC120547117 | gpr31,LOC104934219,LOC104957175 | coding | upstream | 494613 | 28917291 ~ 28924763 (+) |
| gpr31 | NA | coding | upstream | 512996 | 28902376 ~ 28906380 (+) |
| LOC120547119 | NA | coding | upstream | 546773 | 28866213 ~ 28872603 (+) |
| LOC120546866 | LOC103363081,LOC108247050,LOC101159876,LOC107104461 | coding | downstream | 440647 | 29861374 ~ 29875824 (+) |
| LOC120546867 | NA | coding | downstream | 456194 | 29876921 ~ 29882724 (+) |
| LOC120546870 | NA | coding | downstream | 474698 | 29895425 ~ 29943833 (+) |
| LOC120546436 | NA | coding | downstream | 591428 | 30012155 ~ 30022642 (+) |
| LOC120546869 | NA | coding | downstream | 608223 | 30028950 ~ 30083063 (+) |
| G188206 | clvs2,LOC101073081 | non-coding | upstream | 34934 | 29384210 ~ 29384442 (+) |
| G188172 | NA | non-coding | upstream | 257483 | 29157305 ~ 29161893 (+) |
| G188168 | NA | non-coding | upstream | 275829 | 29138073 ~ 29143547 (+) |
| G188122 | NA | non-coding | upstream | 373830 | 29044283 ~ 29045546 (+) |
| G188104 | NA | non-coding | upstream | 435496 | 28983644 ~ 28983880 (+) |
| G188208 | NA | non-coding | downstream | 6698 | 29427425 ~ 29428647 (+) |
| G188177 | smpdl3a | non-coding | downstream | 22620 | 29443347 ~ 29447023 (+) |
| G188281 | NA | non-coding | downstream | 117448 | 29538175 ~ 29538452 (+) |
| G188288 | NA | non-coding | downstream | 155497 | 29576224 ~ 29578102 (+) |
| G188290 | NA | non-coding | downstream | 158908 | 29579635 ~ 29605099 (+) |
| si:ch211-245h14.1 | NA | other | upstream | 107012 | 29292705 ~ 29312364 (+) |
| G188167 | ucn | other | upstream | 282459 | 29134171 ~ 29136917 (+) |
| trim54 | trim54,LOC103375614 | other | upstream | 286676 | 29110958 ~ 29132700 (+) |
| G188063 | NA | other | upstream | 528012 | 28886490 ~ 28891364 (+) |
| ttll2 | ttll2 | other | upstream | 536255 | 28872686 ~ 28883121 (+) |
| G188268 | fabp7,LOC105924611,LOC105419070,LOC101079341,LOC102793361,LOC107727581 | other | downstream | 41122 | 29461849 ~ 29463874 (+) |
| G188296 | LOC107662224,LOC107746645,LOC107750038,LOC107712283,LOC107663761 | other | downstream | 224527 | 29645254 ~ 29645823 (+) |
| btbd9 | btbd9 | other | downstream | 663821 | 30084548 ~ 30097239 (+) |
| angel2 | NA | other | downstream | 904245 | 30324972 ~ 30336202 (+) |
| G188352 | NA | other | downstream | 1190954 | 30611681 ~ 30882446 (+) |
