ism2b (ism2,LOC104967641)


Basic Information

Item Value
gene id ism2b
gene name ism2,LOC104967641
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 12560298 ~ 12574350 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039781277.1
CATCAACCTTCTGAATGTGTGCGTAAAAGGCAAGTTTACCAAAACCGGTTGGCTGGGCGgtgcacatacaaacacacgcaTCCACTCGAACCGGTGGATGAACTTCAGCTGGATAATGGATTAACGCGTCAGAcagataacaacaaaaaaaaagaacgcaCAGCATACTATGAACTCCAGATGTCAATGTATCGGAAGACGACACCCACCCATCCACGACGGATTGACTCACACTTTAAAGTAGTTGAATAAAGCGCGCGCCGGTGCGGACGGTTGAGATTCTACGTGGGTTATTTCACTTCTTTCTGATACTTAAAGCTCTTCCAACtgtggtattttttttattattttttatgggGAAGAGAAGCGTTGAGCTCGAGCAGCCATACGGAGTGACAGTTGCTGCGCGAGGCGCTGGTGCCAGATATGGATAGCACGCGGGATACCTCTAGACGCTGGTGCGCATCTTCATAAAGTGCGACACTTCGAGACTGACGGGGGCCCAAAAACTTCATCTGTCCTGACTCAAAGGTGCTGACAGACGGAGGACGAGCAGGACGCAATCGCTTCTTCCCGACCGACGAGCTAATTTTTAGGGagaacagtttaaaaaaaaaaaaaaaaaaaagcctccacGGTTAGCCTACTTTTACAAATCTTCACAGGAAGCTTTGAAGTAGAGAAGATGCGTCAAGAGGTCGCGAGGAGATTTCACGCGCTGCTCGTGATTTGGTCGATTGTCGTCAGTTTGGGGACCGGGTTTCCTACCAGACACAAGAATGTTGCCCACAAGGCACATGGCCACCCGATTCACAGCGGCGGGGTCCAATATGGCCCTGAGGCTTTGGAGCAGCATAACCAGGTCCAGAGTCTCCTGCCCGAGCCCCAAAACCACCAGAGGAGGTGGCCCCACCCCCAGCACCGCTCCGTTGGGGTTCTTCCACAGCCTGAGCCCGAGGAGGAGACCAAACCTTTCATCCTGGACCTCAAGAACTTTCCAGATCTGGCCAATGCTGACATCAACTCACAGAACCCCAACATACAGGTAACCATCGAGGTGGTGGACGACCCCCAGATGGAGGTAGAGATGGACCTCGCCAAGGAAAAAGACTGGctaccctcctcttcctcctcaccctctTCCACTGTGGATTGGCTTGGAGGCAAGAAGCTTTTCTGGCCCCTATTCTGGAGCTACACGGACGCCGATTCCAGCGAGGACAGCAACAGCCGGTCAGGCGTGGAGGAAACTggcgaggaagaggaggaggaggattaCTCCCTGGATTACGGCAGTGAAGAGCCCTTACCCAGCGGAGTGGGCGGAGACTGGGATACGCGTTGGAATGAAGGCTGGGATCCAGTGCAGAGCTACTATGAGAAGGAGACAGATGAGTGGACTCCATGGTCTCCCTGTTCAGTGACATGTGGAAACGGTGAGAGGAAGAGGACCAAGTCCTGTGGCTACTCCTGCACTCTGACGGAAGCCTCTAAGTGTGACCTGGAGCCTTGTCCCGGTGATGTCAACACTGTTGTAGAGCCTTTCCCTTTCGAGATGGAGAATGGCACAGAGCCATTTGGGACAGATGTGGACAGTTGTGAGAAGTGGCTCAACTGTAAGAGTGAGTTCCTCCAGAGGTACCTCCACCAGGTCCTGTCTGAGCTGCCCAGCTGCCCCTGCTCCTACCCCTCTGAAGTGGGGTACACTGTGGTCAGCGTCTACGATGAGAAGCATGGCCGGCAGTTCCGCTGGCGTGATGCCAGCGGCCCCAAGGAGCGCCTGGACATCTACAAGCCGTCAGCTCGTAGCTGCATCCGCTCAACACTTTCCGGCGATTCATCTACTCTTGCAGCGCAGcattgttgctatggtgatcgCGGGCGGCTGATCACACGGGGGAAAGGCGCAGGCACGCCGAACCTGATCAGCACGGAGTTCTCACCTGAGCTGCACTTTAAGGTGGATGTGCTGCCTTGGATCCTGTGCAAGGGAGACTGGAGTCGCTTCCACGCGGTGCGGCCACCAAATAATGGATTGAGCTGCCCAGAAAACCCCCATGAAGACGTGTTCATGAATGAACTGGAAGAGGCCAGGGAGTACTGAGGGACCACAGCCAAAACTATCACTTCGGAGAGTCAGAGGGCCCAATCCTAATTTGAGAGGAGACTGCCTACTTTAAAGTCATGACATATTACATCTAAACCATGCATCATTCATTTATTAAGTATTGAGGAAATGCACATTTGTGATTGGGAGATTTGTGGGGATAAGGTATGGTGGGGAAGTGTGGCTGTCTCAAGTTAGGATTTGGCACAGTGTCCTGATATTAGGCTCAACTGAACTGAATTACaagaatggaaaaaaagaaaatgcagtgTTCTCCTATCGCTTGCCAACCTGTTCCACATCTGGCATAACatcaagctctctctctctctctctctctctctctctctctttatattcATTACACTCTCCTGGGTGCGTGTAAGCATGATGTCTACCTACTGGCTTTTTTGATGGTGTCCTGGAGCACTTGTGATTGACAATAGAAACAAATGGTAAACATCCTGATTATGCTTCTTGTAGGTTTTACATTAGGAAATGTATGAATGTGGACTGGTTATATTGATGAAACAAACACATGCATGGGAAGAGTCCACCAGATGAATATCCCAACTATGCTGCTACAATATAAAATCCTTCAGGTTTTACAAAGGTATTAAGGGGAACAAGACAACAGGACATCGGTAAACCCAAAAGATGCCACATTTATTCACAGTAATGTAGATTTCAGCCAATGTTTTGGGACATTTAAATTAGTAGATTAGTGGTTAGAAAAATTTGGGATCTCAACCAGAGAGGTAAGCTAAAAGGATTTGAAACATTCTGCTGTCATTATCGAGAGCTTGCTAGTGAGAATGATGAGAATAGTCCATTAGCAGTAATGGTACGCGAACAGCACATTTGatttcaaatgttttgtcaCACAGATTGAGTTTCCTCACATTTTCACAGCCATGAAGATATATGTGATCTGGGTGCCAAAGAGTTAAAAATCAGACTGTTGGTGCCTGTGTAAATCCAGCCTCCTAAGTCTCTACGGTGCAAATGTAGGAAAAATGAAGTTGTTCAGTGAGTAGATTGTGCTCATAGATCTCTACAACGTTCTCAGGGGGACTTACTGACCATGATAAACAAATTTGTGCATTTACCTCGACAGCAGAGCACTTTTGGAACTAGTACAAAGTGTATTGGGGTAAAGATTAATAGGAAGGTTTTGGCGGTCTAACCCAGATTGTAACTGATGAACAGATAATGCTTTTTGTGCAGTTTCAGAGAGCAGTTGGAACCCTTATAAGTGAATAGCTGTTGATGCATTGTGTGTGGTAGAAAGATGTCATTGCTGCTTAGGGCTTAGGGTCTTTGGGTTTATGTACAGAACTTGATTGCATAGAAAGGACATTCCTACTCAAATAAACATTCCTGAGAAGTCATGTAGTTGGAGCCCTTACCCTGGCTTACACGTACAGGTAAAGGCAACGTGGAAGTAGTCACCATTAGCAGAGACCCCATAGGTATTAGTGCAAAGGATTAAAAATGCCTATGTAGTAATCTTACATGTACACATAAATACCTTGGGACTCCAGGAATTGCTCTTTCTATCCAGTCTAATTCTATGGATGTTCGCTCCAAACCTTTTTTCAGGAATTCTGCGTCCAGATGTGTATATGCAAACatgcatttacattttggaatcaCCAATTTTAAAGGAAGGCACTTTATTAAAGATATATCAAAATGTACTCATGTTTGCCATTTGTTGATGATAGTGTTATTGTGAAGGGAAACTCGCCAGCAATGCTGCATTGTTCTATGAAAGTGCATATATCAAGTGTTCTGTTGAGGAAAGCATGATCTTTTTGTGATTTCTGAATCTAGTATTACATTTATGATGTtgtacagtatttatttgtctgttctcttttttttttaagtttgctgAAGTTTTGAAATGTCTCTATACTCAACATGGTGCACTAATCTGACTGAGAAATGAAGGCACCCATTATCAAAAGGGAAACCACTTGCCTCATATCACTTCATACAGCGACATCAAGTGTCTGTGCTTCATTCTACTTTGTACTGCAGTGCTCTATGAATATGTTGTTGCAATTATGCTGAAGAAATATATAAAGAACTTGCATTCATCATCTGA

Function

symbol description
ism2 Predicted to be located in extracellular region.

NR:

description
PREDICTED: isthmin-2

GO: NA

KEGG:

id description
K24435 ISM; isthmin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039781277.1 True 4220 mRNA 0.46 6 12560298 12574350

Neighbor

gene id symbol gene type direction distance location
sptlc2b sptlc2,LOC103357434,LOC100704591 coding upstream 1094 12540595 ~ 12559204 (+)
snw1 snw1,LOC102781075 coding upstream 34159 12513600 ~ 12526139 (+)
LOC120546813 cep128 coding upstream 556414 11889996 ~ 12003884 (+)
gtf2a1 gtf2a1 coding upstream 673934 11872976 ~ 11886364 (+)
LOC120547096 brms1l,LOC103358934,LOC100691440,LOC101472597,LOC102200527,LOC103380712 coding upstream 969752 11578169 ~ 11590546 (+)
LOC120546360 NA coding downstream 8954 12583304 ~ 12589092 (+)
LOC120546361 NA coding downstream 15555 12589905 ~ 12598724 (+)
LOC120546363 NA coding downstream 43357 12617707 ~ 12629854 (+)
LOC120546362 NA coding downstream 57663 12632013 ~ 12638525 (+)
ccdc85cb ccdc85c coding downstream 66306 12640656 ~ 12690800 (+)
G183868 NA non-coding upstream 55175 12504685 ~ 12505123 (+)
G183866 NA non-coding upstream 79769 12480307 ~ 12480529 (+)
G183825 NA non-coding upstream 381448 12174579 ~ 12178850 (+)
G183762 NA non-coding upstream 673161 11886595 ~ 11887137 (+)
G183735 NA non-coding upstream 900407 11659672 ~ 11659891 (+)
G183890 NA non-coding downstream 54939 12629289 ~ 12637536 (+)
G183891 NA non-coding downstream 64968 12639318 ~ 12640078 (+)
G183896 ccnk non-coding downstream 126818 12701168 ~ 12703242 (+)
G183933 NA non-coding downstream 171734 12746084 ~ 12747667 (+)
G184000 phip non-coding downstream 596572 13170922 ~ 13172244 (+)
ches1 foxn3 other upstream 691106 11764143 ~ 11869192 (+)
G183540 sf3b6,pm14,SF3B6 other upstream 1893826 10622736 ~ 10666472 (+)
cdc42bpab fzd3,LOC103374788 other upstream 2160486 10236949 ~ 10399812 (+)
LOC120546402 NA other upstream 2447663 10111070 ~ 10112635 (+)
il17a/f3 NA other upstream 2957950 9595376 ~ 9602348 (+)
bcl11bb LOC103368061 other downstream 132868 12707218 ~ 12739384 (+)
LOC120546167 NA other downstream 372649 12946999 ~ 13008411 (+)
G183994 phip other downstream 571125 13145475 ~ 13247416 (+)
LOC120546706 wdcp other downstream 893885 13468235 ~ 13474159 (+)
LOC120546742 plcb1 other downstream 1450134 14024484 ~ 14140769 (+)

Expression


Co-expression Network