G183762


Basic Information

Item Value
gene id G183762
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 11886595 ~ 11887137 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU248841
TTCGATTTATGTACACCGAAAACAAAGGCTGACACTGGTAGTGGCTCGTTGTTATCCTCAAATAACAAATGTGGGTGCccaggtagctcagttggtagagcgtgcgcccatatatagaggtttactcatcgacacagcgggcccgggtttgactccgacctgcggccctttgctgcatgtcctttccccctcctctctctcttctgctgtcctatcagaATAAAGGCTGAAACtgtccaaaaaaataatctttaagaaAGAAATAAGTGCCCAAAGAGatttcaaacacatttcaagtagaacactgaaaaataaaaataacggGCTTTCAGGACATGATTCAGTAGCTCTCCGTGATTGGTCACAGTCAAAAAAACATCCGCTCACAGTTGCTTAATTATTTTATGTTCTTATCAATTGCTGTTGCGTGTGCCTTTTGAACTTTATTTCAATTTTCTGATATGAAATGATAGGTGAGCTTACGAGAAGGATGTCTATAAAATTGTATTCTCTGCTTTCtgactgttttgtgtgtgttctaaC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU248841 True 543 lncRNA 0.41 1 11886595 11887137

Neighbor

gene id symbol gene type direction distance location
gtf2a1 gtf2a1 coding upstream 231 11872976 ~ 11886364 (+)
LOC120547096 brms1l,LOC103358934,LOC100691440,LOC101472597,LOC102200527,LOC103380712 coding upstream 296049 11578169 ~ 11590546 (+)
LOC120547310 psma6,LOC103358936,LOC105930638,LOC102217550,LOC103457804,LOC107095481,LOC106935624 coding upstream 342617 11536311 ~ 11543978 (+)
LOC120547014 LOC103358937 coding upstream 377216 11499969 ~ 11509379 (+)
flrt2 LOC104961132,LOC103360508 coding upstream 680228 11032427 ~ 11206367 (+)
LOC120546813 cep128 coding downstream 2859 11889996 ~ 12003884 (+)
snw1 snw1,LOC102781075 coding downstream 626463 12513600 ~ 12526139 (+)
sptlc2b sptlc2,LOC103357434,LOC100704591 coding downstream 653458 12540595 ~ 12559204 (+)
ism2b ism2,LOC104967641 coding downstream 673161 12560298 ~ 12574350 (+)
LOC120546360 NA coding downstream 696167 12583304 ~ 12589092 (+)
G183735 NA non-coding upstream 226704 11659672 ~ 11659891 (+)
G183711 psmc1,psmc1b non-coding upstream 236590 11647337 ~ 11650005 (+)
G183709 psmc1a,psmc1 non-coding upstream 241750 11638856 ~ 11644845 (+)
G183700 calm1,LOC107396020,LOC102778633,LOC102293206,LOC103380713 non-coding upstream 252191 11568285 ~ 11634404 (+)
G183696 NA non-coding upstream 328802 11557524 ~ 11557793 (+)
G183825 NA non-coding downstream 287442 12174579 ~ 12178850 (+)
G183866 NA non-coding downstream 593170 12480307 ~ 12480529 (+)
G183868 NA non-coding downstream 617548 12504685 ~ 12505123 (+)
G183890 NA non-coding downstream 742152 12629289 ~ 12637536 (+)
G183891 NA non-coding downstream 752181 12639318 ~ 12640078 (+)
ches1 foxn3 other upstream 17403 11764143 ~ 11869192 (+)
G183540 sf3b6,pm14,SF3B6 other upstream 1220123 10622736 ~ 10666472 (+)
cdc42bpab fzd3,LOC103374788 other upstream 1486783 10236949 ~ 10399812 (+)
LOC120546402 NA other upstream 1773960 10111070 ~ 10112635 (+)
il17a/f3 NA other upstream 2284247 9595376 ~ 9602348 (+)
bcl11bb LOC103368061 other downstream 820081 12707218 ~ 12739384 (+)
LOC120546167 NA other downstream 1059862 12946999 ~ 13008411 (+)
G183994 phip other downstream 1258338 13145475 ~ 13247416 (+)
LOC120546706 wdcp other downstream 1581098 13468235 ~ 13474159 (+)
LOC120546742 plcb1 other downstream 2137347 14024484 ~ 14140769 (+)

Expression


Co-expression Network