Gene
RNA
| Item | Value |
|---|---|
| gene id | G191218 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053130.1 |
| NCBI id | CM020927.1 |
| chromosome length | 36824488 |
| location | 2090115 ~ 2153393 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| id | name | namespace |
|---|---|---|
| GO:0044459 | obsolete plasma membrane part | cellular_component |
| GO:0005911 | cell-cell junction | cellular_component |
| GO:0005921 | gap junction | cellular_component |
| GO:0005922 | connexin complex | cellular_component |
| GO:0030054 | cell junction | cellular_component |
| GO:0098796 | membrane protein complex | cellular_component |
| GO:0098797 | plasma membrane protein complex | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU259603 | True | 456 | lncRNA | 0.47 | 4 | 2090115 | 2153393 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnat-agu_12 | NA | coding | upstream | 37114 | 2052927 ~ 2053001 (+) |
| trnat-ugu_6 | NA | coding | upstream | 44296 | 2045746 ~ 2045819 (+) |
| LOC120547583 | opn4,LOC107372404 | coding | upstream | 99301 | 1972182 ~ 1990814 (+) |
| trnat-agu_10 | NA | coding | upstream | 126016 | 1964026 ~ 1964099 (+) |
| trnat-cgu_3 | NA | coding | upstream | 129150 | 1960892 ~ 1960965 (+) |
| LOC120548117 | LOC103362069,LOC108229017,LOC106525817,LOC101169632,LOC101471088,LOC100695262 | coding | downstream | 39907 | 2193300 ~ 2200457 (+) |
| rps27a | rps27a | coding | downstream | 351374 | 2504767 ~ 2508381 (+) |
| LOC120548433 | NA | coding | downstream | 375787 | 2529180 ~ 2637276 (+) |
| LOC120548306 | NA | coding | downstream | 504464 | 2657857 ~ 2663678 (+) |
| LOC120548310 | NA | coding | downstream | 675666 | 2829059 ~ 2829748 (+) |
| G191233 | NA | non-coding | upstream | 56059 | 2021693 ~ 2034056 (+) |
| G191214 | NA | non-coding | upstream | 90071 | 1999191 ~ 2000044 (+) |
| G191229 | NA | non-coding | upstream | 104365 | 1985439 ~ 1985750 (+) |
| G191227 | NA | non-coding | upstream | 106520 | 1972658 ~ 1983595 (+) |
| G191220 | NA | non-coding | upstream | 114915 | 1956619 ~ 1975200 (+) |
| LOC120548168 | NA | non-coding | downstream | 24479 | 2177872 ~ 2185585 (+) |
| G191247 | NA | non-coding | downstream | 25786 | 2179179 ~ 2197853 (+) |
| G191246 | NA | non-coding | downstream | 46021 | 2199414 ~ 2199653 (+) |
| G191242 | NA | non-coding | downstream | 56640 | 2210033 ~ 2229106 (+) |
| G191270 | NA | non-coding | downstream | 112113 | 2265506 ~ 2390590 (+) |
| G191230 | NA | other | upstream | 85887 | 2002812 ~ 2004228 (+) |
| G191212 | NA | other | upstream | 140881 | 1948390 ~ 1949234 (+) |
| G190785 | NA | other | upstream | 310133 | 1701556 ~ 1779982 (+) |
| G190758 | NA | other | upstream | 474569 | 1581834 ~ 1615546 (+) |
| G190757 | NA | other | upstream | 546823 | 1542856 ~ 1543292 (+) |
| LOC120548303 | usp54,LOC106455943,LOC108247408,LOC104941643,LOC107104721 | other | downstream | 115435 | 2268828 ~ 2316402 (+) |
| G191565 | sptbn1 | other | downstream | 602761 | 2756154 ~ 2761679 (+) |
| G191567 | sptbn1 | other | downstream | 608657 | 2762050 ~ 2766062 (+) |
| G191571 | NA | other | downstream | 617240 | 2770633 ~ 3018448 (+) |
| G191573 | sptbn1,LOC107396444 | other | downstream | 621915 | 2775308 ~ 2778367 (+) |
