trnat-cgu_3


Basic Information

Item Value
gene id trnat-cgu_3
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 1960892 ~ 1960965 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1093
GGTGCTGTGGCTTAGTTGGTTAAAGTGCCTGTCTCGTAAACAGGAGAtcctgggttcgaatcccagcCGTGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1093 True 74 tRNA 0.54 1 1960892 1960965

Neighbor

gene id symbol gene type direction distance location
LOC120548430 NA coding upstream 35346 1885951 ~ 1925546 (+)
LOC120548429 NA coding upstream 78844 1878418 ~ 1882048 (+)
LOC120548061 NA coding upstream 105185 1849313 ~ 1855707 (+)
LOC120548423 NA coding upstream 208915 1749904 ~ 1751977 (+)
LOC120548209 NA coding upstream 291031 1629477 ~ 1669861 (+)
trnat-agu_10 NA coding downstream 3061 1964026 ~ 1964099 (+)
LOC120547583 opn4,LOC107372404 coding downstream 11217 1972182 ~ 1990814 (+)
LOC120547899 LOC102301710,LOC107396804,LOC100696318 coding downstream 45179 2006144 ~ 2111871 (+)
trnat-ugu_6 NA coding downstream 84781 2045746 ~ 2045819 (+)
trnat-agu_12 NA coding downstream 91962 2052927 ~ 2053001 (+)
G191209 NA non-coding upstream 29041 1931283 ~ 1931851 (+)
G191206 NA non-coding upstream 39035 1899761 ~ 1921857 (+)
G191205 NA non-coding upstream 46961 1909632 ~ 1913931 (+)
LOC120548173 LOC101476819 non-coding upstream 143750 1816084 ~ 1817142 (+)
LOC120548281 NA non-coding upstream 145132 1814427 ~ 1815760 (+)
G191227 NA non-coding downstream 11693 1972658 ~ 1983595 (+)
G191229 NA non-coding downstream 24474 1985439 ~ 1985750 (+)
G191214 NA non-coding downstream 38226 1999191 ~ 2000044 (+)
G191233 NA non-coding downstream 60728 2021693 ~ 2034056 (+)
G191218 NA non-coding downstream 129150 2090115 ~ 2153393 (+)
G191212 NA other upstream 11658 1948390 ~ 1949234 (+)
G190785 NA other upstream 180910 1701556 ~ 1779982 (+)
G190758 NA other upstream 345346 1581834 ~ 1615546 (+)
G190757 NA other upstream 417600 1542856 ~ 1543292 (+)
G190735 NA other upstream 421054 1535297 ~ 1539838 (+)
G191230 NA other downstream 41847 2002812 ~ 2004228 (+)
G191236 NA other downstream 86992 2047957 ~ 2104697 (+)
LOC120548303 usp54,LOC106455943,LOC108247408,LOC104941643,LOC107104721 other downstream 307863 2268828 ~ 2316402 (+)
G191565 sptbn1 other downstream 795189 2756154 ~ 2761679 (+)
G191567 sptbn1 other downstream 801085 2762050 ~ 2766062 (+)

Expression


Co-expression Network