LOC120548061


Basic Information

Item Value
gene id LOC120548061
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 1849313 ~ 1855707 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039784012.1
CTGCTAGATCACCATCACCACGCCCTCTACCACGCCTCTCCTCCCAAAACAGGAGGTAGAGTATCATCCATGTCAGCGTACTGACTGGAGACTGCAGAGGACACAACATCTGACAACTCTTTCAGCTCGGCTCACAGCTTTCAAAAGGTTACCCTCTGAAGAATGGACGTTAACAACACTACACAGGACAACAGCATCCTCACCATTCCACCTCCAATACCATTaggctataataataattacaccaACAGCACCTCAGGCTCCCAAAATCTCACCAACATCCTCTCAGGCTCCTATAATTACACCAACAGCATCATTATCCCCTACGCTGAATCTGATTTCATCATTTATGTGGGGACGTGCATCATCATTGCCATCGGCCTTCCTTTGACCCTCATCGCCATCTACTCTCTCTACTCTCAGGTACGAAATGATCACGTTGCTCCCATCTACGTCATCAACCTTCTGATTTCTGACATCGTCCAGCTCTGCTACATGATCTGTGTGGTGGCACTACCTCAGAGCGTTATGAAATCCATGATAGACGTCACAATAGCCATTATCTTCCAGTTAATGTACATCTACAGTCTGATGACCAGTGTGTGCTTCATGGTGTGCATCGCCCTGGAAAGGTATTTGCTGATCGTCTTCCCACTGTGGTACCGCTGCAGACGAACCATCAAGTCCACCGTGGTGATCTGTGTCGTGGCCTGGGTCCTTCCTTCTCTCTACTTTCTCATCTCCATTGTCTTTCTGCTCCTTCCCTTCCCACTGCTCATATTCTTCTGCTGTGCGACTCTCAAAGCCCTGTCTGCCTCCGTCTCGATCCTGCCTGAGGAAAAACGACGAATTGTAGGAACTTTGGTCCTGATGCTGCTAATTTACACTCTGCTTTTCCTGCCCTACATCATTTGTTCAATAGTATTGAATAACACAAATAATGAATCACCAAGTAATACTGTCTCCTACCTAAATACTCTCGTCCACCTGTCTCCTGTGTTCCTTGAGCTGAATCCTCTTGCAGACTTGATTCTGTATATTTTCATGAAGAAAGGGGCCCTAGACAAGATTTTGgcctctgtgtgttgttgcagAGTTGCAGACAAAGATGTCAGCAGTCTGGAAAACAACACTAATGTTTAGAACTAGAAAAGTGGACtcaggctacatccacactGATTTTAAGCAGAATTTTTGAGACAAGAAGATCTCCGTGCACACAACGAGTTTTAGCTCCAGTGACAGAACTAATCTCAGTCCATGTTACAGACCTGCAAACCCAGAAGGGCTGAACAATGTGACACATTTTATACAACAGGGTTTGAGCTTTAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039784012.1 True 1335 mRNA 0.46 4 1849313 1855707

Neighbor

gene id symbol gene type direction distance location
LOC120548423 NA coding upstream 97336 1749904 ~ 1751977 (+)
LOC120548209 NA coding upstream 179452 1629477 ~ 1669861 (+)
LOC120548322 elovl3,LOC103477396 coding upstream 380062 1463237 ~ 1469251 (+)
LOC120548015 NA coding upstream 496982 1349395 ~ 1352331 (+)
LOC120548224 NA coding upstream 514369 1333473 ~ 1334944 (+)
LOC120548429 NA coding downstream 22711 1878418 ~ 1882048 (+)
LOC120548430 NA coding downstream 30244 1885951 ~ 1925546 (+)
trnat-cgu_3 NA coding downstream 105185 1960892 ~ 1960965 (+)
trnat-agu_10 NA coding downstream 108319 1964026 ~ 1964099 (+)
LOC120547583 opn4,LOC107372404 coding downstream 116475 1972182 ~ 1990814 (+)
LOC120548173 LOC101476819 non-coding upstream 32171 1816084 ~ 1817142 (+)
LOC120548281 NA non-coding upstream 33553 1814427 ~ 1815760 (+)
G190786 NA non-coding upstream 55741 1785481 ~ 1793572 (+)
G190784 NA non-coding upstream 150640 1695738 ~ 1698673 (+)
G190765 LOC106676760 non-coding upstream 158427 1682491 ~ 1690886 (+)
G191206 NA non-coding downstream 44054 1899761 ~ 1921857 (+)
G191205 NA non-coding downstream 53925 1909632 ~ 1913931 (+)
G191209 NA non-coding downstream 75576 1931283 ~ 1931851 (+)
G191220 NA non-coding downstream 100912 1956619 ~ 1975200 (+)
G191227 NA non-coding downstream 116951 1972658 ~ 1983595 (+)
G190785 NA other upstream 69331 1701556 ~ 1779982 (+)
G190758 NA other upstream 233767 1581834 ~ 1615546 (+)
G190675 NA other upstream 282192 1403523 ~ 1567121 (+)
G191212 NA other downstream 92683 1948390 ~ 1949234 (+)
G191230 NA other downstream 147105 2002812 ~ 2004228 (+)
G191236 NA other downstream 192250 2047957 ~ 2104697 (+)
LOC120548303 usp54,LOC106455943,LOC108247408,LOC104941643,LOC107104721 other downstream 413121 2268828 ~ 2316402 (+)
G191565 sptbn1 other downstream 900447 2756154 ~ 2761679 (+)

Expression


Co-expression Network