LOC120548281


Basic Information

Item Value
gene id LOC120548281
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 1814427 ~ 1815760 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005637163.1
ACGCAGCAGCAATCAGGCTCACTGGACTTActTTTCAGATCAGTTTATGCCTTTGCATCTTGCTGTTCCAGTTTCAAGAAGTTAAGGAAGATAACTGGAGATGTGATAACGATACCAGaagactgagaagaaACTGACCCTCATTAGAAAGATGATGGAGACCACATTTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005637163.1 True 172 lncRNA 0.42 3 1814427 1815760

Neighbor

gene id symbol gene type direction distance location
LOC120548423 NA coding upstream 62450 1749904 ~ 1751977 (+)
LOC120548209 NA coding upstream 144566 1629477 ~ 1669861 (+)
LOC120548322 elovl3,LOC103477396 coding upstream 345176 1463237 ~ 1469251 (+)
LOC120548015 NA coding upstream 462096 1349395 ~ 1352331 (+)
LOC120548224 NA coding upstream 479483 1333473 ~ 1334944 (+)
LOC120548061 NA coding downstream 33553 1849313 ~ 1855707 (+)
LOC120548429 NA coding downstream 62658 1878418 ~ 1882048 (+)
LOC120548430 NA coding downstream 70191 1885951 ~ 1925546 (+)
trnat-cgu_3 NA coding downstream 145132 1960892 ~ 1960965 (+)
trnat-agu_10 NA coding downstream 148266 1964026 ~ 1964099 (+)
G190786 NA non-coding upstream 20855 1785481 ~ 1793572 (+)
G190784 NA non-coding upstream 115754 1695738 ~ 1698673 (+)
G190765 LOC106676760 non-coding upstream 123541 1682491 ~ 1690886 (+)
G190662 NA non-coding upstream 251327 1506179 ~ 1563100 (+)
G190680 NA non-coding upstream 286494 1523220 ~ 1527933 (+)
LOC120548173 LOC101476819 non-coding downstream 324 1816084 ~ 1817142 (+)
G191206 NA non-coding downstream 84001 1899761 ~ 1921857 (+)
G191205 NA non-coding downstream 93872 1909632 ~ 1913931 (+)
G191209 NA non-coding downstream 115523 1931283 ~ 1931851 (+)
G191220 NA non-coding downstream 140859 1956619 ~ 1975200 (+)
G190785 NA other upstream 34445 1701556 ~ 1779982 (+)
G190758 NA other upstream 198881 1581834 ~ 1615546 (+)
G190757 NA other upstream 271135 1542856 ~ 1543292 (+)
G190735 NA other upstream 274589 1535297 ~ 1539838 (+)
LOC120547663 NA other upstream 315200 1491985 ~ 1499227 (+)
G191212 NA other downstream 132630 1948390 ~ 1949234 (+)
G191230 NA other downstream 187052 2002812 ~ 2004228 (+)
G191236 NA other downstream 232197 2047957 ~ 2104697 (+)
LOC120548303 usp54,LOC106455943,LOC108247408,LOC104941643,LOC107104721 other downstream 453068 2268828 ~ 2316402 (+)
G191565 sptbn1 other downstream 940394 2756154 ~ 2761679 (+)

Expression


Co-expression Network