G191330


Basic Information

Item Value
gene id G191330
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 2512842 ~ 2514250 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU259784
GGCTAGGGTGTAGAGGCTAGGATGGAGGGGCTAGGATGGAGGGGGTAGGGTGTAGGATGGAGGGCGTAGGATATAAGGGGTAGGATGGTGGGGGTCGATGTAAGAGGGTAGGATGTAGGGGCTAAGCTGTAGAAGCTAGGATGTAGGGCTAGGATGGAGGGGCTAGGATGTAGGGGGTAGGATGTAGAGGCTAGGATGTAGGGGGTAGGATGTAGAGGCTAGGATGTAGGGGGTAGGATGTAGAGGCTAGGATGTAGGGGTAGGGATAGAGAGGCTGGGATGAGGAGGGGCTAGGGTGTATGGGGTAGGATGTAGAGCCTAGGATGTAGAGGCTAGGCTGTAGGGGGTAGGATGTAGGGGGTAGGATAGAGAGGCTGGGATGGAGGGGCTAGGCTGTAGGGGGTAGGATGTAGAGCCTAGGATGTAGAGGCTAGGCTGGAGGGGCTAGGTTGTAGGGGGTAGTATGGAGGGTCTAGGTTGTAGGGGTAGGGGCTAAGATGAAGGGGCTAGGCTGGAGGGGCTAGGATGTAGGGGCTAGGATGTAGGGGCTAGGATGTAGGGGCTAGGATgtaggagggatctctgaggcgctataggcgaggatacaagagagcagccttcctggaagccgttGCTAACTCCTCGCACACAGCAGAGGAGGAAACGACATCTCATCGCCGCTCTGAAAACACCCGGGAGAGCGTTCGCCCCACGTGGGCCGAGTCCTTTACAGCGGtccgggttcgagtccgacctgtggccctttgctgcatgtctcccccctctctcccaccTTCCCTGTCCATCACCTCtgaaataaaaaagggaaaaaagccccaaaaaaataacctttaaaataaaaacaacacacatttcctcccaatcctttcctctctctcctttcctctctctcctttcctctctctcctttcctctctctcctttcctctctcctcgcaGGATTCCCTCGCTGTGTCTCTCCCGTGCTTCCTTGGCGGGACGGACTAAGACGCTAAGAGGAAaggaagcaagtgaaggaaacaAGGATGCAATTGTAGAACCTTGGATGAATGTTTGAAGCCGTGGTCTGTACGGTTTTCCGCCCTGAAAACGGGTCCTTTGTTAATATTAAATTTTTAAAGTTATTAGAATCTCGTCGTGGTGTTTCTGGCGCCGGTGAAGAGCGGCGGTCAGATCTTGATGTCCTGCGACTCCACCATCTTGGCGAGCGTCTTCTTCACTCGGAGGATGGTGAGGCGAGAGGCCGGGTTATGAGCCCAGCACTCGGACATCAGCTTCAGCATGGCCCG

Function

GO: NA

KEGG:

id description
ko03008 Ribosome biogenesis in eukaryotes

RNA

RNA id representative length rna type GC content exon number start site end site
TU259784 True 1310 lncRNA 0.54 2 2512842 2514250

Neighbor

gene id symbol gene type direction distance location
rps27a rps27a coding upstream 4461 2504767 ~ 2508381 (+)
LOC120548117 LOC103362069,LOC108229017,LOC106525817,LOC101169632,LOC101471088,LOC100695262 coding upstream 312385 2193300 ~ 2200457 (+)
trnat-agu_15 NA coding upstream 391377 2121392 ~ 2121465 (+)
trnat-agu_14 NA coding upstream 394022 2118747 ~ 2118820 (+)
trnat-agu_12 NA coding upstream 459841 2052927 ~ 2053001 (+)
LOC120548433 NA coding downstream 14930 2529180 ~ 2637276 (+)
LOC120548306 NA coding downstream 143607 2657857 ~ 2663678 (+)
LOC120548310 NA coding downstream 314809 2829059 ~ 2829748 (+)
znf365 znf365,LOC100708019,LOC101465348,LOC102787219 coding downstream 609517 3123767 ~ 3137751 (+)
trnar-acg_20 NA coding downstream 635564 3149814 ~ 3149886 (+)
G191329 NA non-coding upstream 84 2510351 ~ 2512758 (+)
G191323 NA non-coding upstream 12632 2496445 ~ 2500210 (+)
G191309 NA non-coding upstream 17637 2437062 ~ 2495205 (+)
G191310 NA non-coding upstream 59279 2444673 ~ 2453563 (+)
G191306 NA non-coding upstream 77207 2421879 ~ 2435635 (+)
G191333 NA non-coding downstream 8453 2522703 ~ 2523348 (+)
G191335 NA non-coding downstream 16574 2530824 ~ 2534932 (+)
G191336 NA non-coding downstream 19493 2533743 ~ 2534276 (+)
G191345 NA non-coding downstream 61981 2576231 ~ 2577208 (+)
G191340 NA non-coding downstream 127770 2642020 ~ 2643454 (+)
LOC120548303 usp54,LOC106455943,LOC108247408,LOC104941643,LOC107104721 other upstream 196440 2268828 ~ 2316402 (+)
G191236 NA other upstream 408145 2047957 ~ 2104697 (+)
G191230 NA other upstream 508614 2002812 ~ 2004228 (+)
G191212 NA other upstream 563608 1948390 ~ 1949234 (+)
G190785 NA other upstream 732860 1701556 ~ 1779982 (+)
G191565 sptbn1 other downstream 241904 2756154 ~ 2761679 (+)
G191567 sptbn1 other downstream 247800 2762050 ~ 2766062 (+)
G191571 NA other downstream 256383 2770633 ~ 3018448 (+)
G191573 sptbn1,LOC107396444 other downstream 261058 2775308 ~ 2778367 (+)
LOC120548437 NA other downstream 579717 3093967 ~ 3110958 (+)

Expression


Co-expression Network