G191340


Basic Information

Item Value
gene id G191340
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 2642020 ~ 2643454 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU259802
cgacgccctgatcacattcacacagttccacattcatacctggaagctgcccagtacaaccacagtctgatctgctggccactgagcagctccactggagcggttggggctaagggccttgctcaagggcacctcagtggtaacaagctcgcttctctaacacCTAAGCCACCACTGCTGTCTTGGACTCATCTTGGACTCACTGGTATTTGGACTTGCTCTTGTCTCCGTCTCGGCCATTGGACTCGCCAAATATTCTAGCTAATATTCATTGATGAAGTGCGCTCattcagaaaacaggtattagAACGGTCATCGTGATTGGTTGCCTGGTATACTCCTGGCTGCATCATATACCTCAATCATAAGGtatcaatcattttcattttagccACAGACACGATGTCAGCAAGCACTTTGTACTATgaattcttcaggacaagtcataagttcaagaatgggaacatttccattttatattttaagtaaataatgTGTCCTAATTTGACCCTTTCTTTCTACGATCTCGACTCGATcttttggactcggtcttgtcttggactcggtcttgacttggacttaaACCTCTTTTTTACTCGACTACCGTAGTCCTGGTattggactcgacaaaggtggacttgaaTACAGCCCTGCCTAAAGGACATAATTTTGcatgttcaaaatgtttttaaacgCTTATTTGAGCCCATGAAATAGAGATGTTAATTATCTGATTGCCatatgccatattttccctctgggctcaccaaaacggacgtaaaagcatattaaccattcacagcacgtgatcgctagtaaacatattacatctttgatgtcatttttcagttttttaagaATCGGCTTAGGAATCGGAATAGTTTTAAAAGtacatcggaatcgtaaaaatataaaacaatacccaaccctagtcatgtagagaaaaaaaagtacatgtaaCTGACATCTTAATGATGCCAAAGAAAGTGGTAAAATAATGCAGACTGTGCTGTGGGTGAGCTGCAGACAGTCTGATGTACAGGGTGTCTCTGCAGAGTGCATGTGTGCTGTGTTTCTGCAAACTTCATTTATTAAAAGAGAAATATACCGAGAAGCCAAGGAACgtccacaaaaaaaaaggaaatacatgTCGCGGTTGTTGAAGATGTAAAATGCTGCACTGAGATCAGTTTGGGTTTGTAAATGTTTTGCTGTGTACAGGTTGTCACGTTGTGTAGCGCTTTTGATTTCCCATGATTTGTATCATACTGTACATGGAAATATATAAATGATGCTCAGATGcatgaatttatttttaaaccaaaacatgtTTGTGGATGATAGATGATAATTTTATGGTGTGAATTATGTTCACCGGTTGATTTTTATACCGAAGTGATTGTGATCaaagtgtgtgtacgtgtgtcagTGTATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU259802 True 1435 lncRNA 0.40 1 2642020 2643454

Neighbor

gene id symbol gene type direction distance location
LOC120548433 NA coding upstream 4744 2529180 ~ 2637276 (+)
rps27a rps27a coding upstream 133639 2504767 ~ 2508381 (+)
LOC120548117 LOC103362069,LOC108229017,LOC106525817,LOC101169632,LOC101471088,LOC100695262 coding upstream 441563 2193300 ~ 2200457 (+)
trnat-agu_15 NA coding upstream 520555 2121392 ~ 2121465 (+)
trnat-agu_14 NA coding upstream 523200 2118747 ~ 2118820 (+)
LOC120548306 NA coding downstream 14403 2657857 ~ 2663678 (+)
LOC120548310 NA coding downstream 185605 2829059 ~ 2829748 (+)
znf365 znf365,LOC100708019,LOC101465348,LOC102787219 coding downstream 480313 3123767 ~ 3137751 (+)
trnar-acg_20 NA coding downstream 506360 3149814 ~ 3149886 (+)
trnah-gug_17 NA coding downstream 507019 3150473 ~ 3150544 (+)
G191345 NA non-coding upstream 64812 2576231 ~ 2577208 (+)
G191335 NA non-coding upstream 107088 2530824 ~ 2534932 (+)
G191336 NA non-coding upstream 107744 2533743 ~ 2534276 (+)
G191333 NA non-coding upstream 118672 2522703 ~ 2523348 (+)
G191330 NA non-coding upstream 127770 2512842 ~ 2514250 (+)
G191548 NA non-coding downstream 54509 2697963 ~ 2700447 (+)
G191555 NA non-coding downstream 59744 2703198 ~ 2707931 (+)
G191556 LOC104953499 non-coding downstream 72582 2716036 ~ 2725525 (+)
G191560 LOC108247402,LOC107090937 non-coding downstream 94690 2738144 ~ 2740053 (+)
G191568 NA non-coding downstream 174530 2817984 ~ 2835208 (+)
LOC120548303 usp54,LOC106455943,LOC108247408,LOC104941643,LOC107104721 other upstream 325618 2268828 ~ 2316402 (+)
G191236 NA other upstream 537323 2047957 ~ 2104697 (+)
G191230 NA other upstream 637792 2002812 ~ 2004228 (+)
G191212 NA other upstream 692786 1948390 ~ 1949234 (+)
G190785 NA other upstream 862038 1701556 ~ 1779982 (+)
G191565 sptbn1 other downstream 112700 2756154 ~ 2761679 (+)
G191567 sptbn1 other downstream 118596 2762050 ~ 2766062 (+)
G191571 NA other downstream 127179 2770633 ~ 3018448 (+)
G191573 sptbn1,LOC107396444 other downstream 131854 2775308 ~ 2778367 (+)
LOC120548437 NA other downstream 450513 3093967 ~ 3110958 (+)

Expression


Co-expression Network