G193902


Basic Information

Item Value
gene id G193902
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 14818850 ~ 14820963 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU263261
TGGCAATTTGTTCACAGTAAGAAACATGATTCAAAACAAGACAATTTATATATCATAGACAAAAATGAACAATATTATAGATCATGCACAACTTTTGGCAATTGCACAACTAGACTACAAGGTGTTTAATAATTTGTTTAATGTGTAAACTTTAAAACCAACCATTATATATTTACAGTACTCGCTCACCCTAAATTTATATCTTTTATCACAGATAATTAGGGCATGCTACTATAAAATAGCAAATAAAAAAGAGGACATACAGCTTTTGAGACTGAAGATCAAAGACACATACTACTGACTGTTCAGTGAGTTGGCTTTACAATAAAGTAGAATGGTGCTActggatatatttatattccaTCTTCTTCTATGTACAGGTTTACAGTATGTCCACCTCTAAGGCCAGGCTTTCATGTCCATACATCACATTTTTGTAGCGTACCATCATCTGAGAAACAGTCATTGAAAGCACCATGTTATCTTACAGAGCAAAACCAACTACATATGTCTGTCTTATAAGCATTCAACAATCagatttccttttttatatCAATATTCATTAGTGTATACTTACAACTCAAAGACCTCTAGTTATTGGGCGGTAAATGTTAATGTTTATCCAGGGCGCAAAGTGGTTTATTTAATGTAATAAAATTATGACTTAAATTATCTATTAATTATATTTCTCTGGTATGGAGGCAAAGCAAGATGTGTTCCGCCTTAAAGAGACAAgcattttgttgtttgggttgtATCATCTATTCTAGATATAAAGAAACTGAATTATAGAAACAAAATTAAAAGGTTACACTTGACGAATTGTATAGCCTACTGGCCTAAATGTCCTAGTATATATCGTAGACATGATCATTCTCTGTCATTCAATGCTGAATTTAATGTAACCTGATCAAGCCtttacacatatacagtaaagCGTATACCTTATTTCTCTTGTACTGACCCAATAATTTAATGGTGCTTTTctcatttaactttttttttttttttttatagcttttgAGGTATATTATTTCAACAACTCAGTCTGTTTTTCCTATTCTGACATGATCCTAGTTAAGAAAAATTATATGTCAAAGGCAGTAAAGCGTTCATCAACAGTAGACAATGGCAACTGAATATTCATAAAATACTAGAGCAAGGGAATCTTGATGCTAATTGGATATTTTGTGCTGGGTAACAGTATCAACCAATTTTATCAATTCACTGCCCTCAAACTAGAGGCCCTAGAGTCTGGCTCAGTGGATTGATCTTCATTAGGTATTATACAGTAGATACTCTATCCATGTGGGTTAAAAACATTACTTTGAATGATCGCAGCTATCGGCGTGAAATTAATtcgaaaaaacaaaacaaattccaaaaaAGCAAACTATTTCAGCACAATTGTAACACAGCAACTTAACTCAGTAACAGAGTCTTACACATTAGTACAGTTTGGGAATTCCCTTGTAACAATTCTCTCCATATTTCTTCCAATTCCTCCtgaaaacatgcaaacaaataataaaaaaatacagggACAGTCAGCTGCTTTGATATCACATGCACATCAGAAGTTGCTTGTTTTGATGATATGATAATGAAAGAGACTCTTTGCAAACACAACTGCTATGGTATTTCTGCTTTATCTAAATGACATTGATTTTGGGCTGTAGGAATAACTGCCTTTAACACAAACCAAATAACTCAAAGTTCAATCTTGCTTTCTCTGTCATCCTTTTTCCTGAAGATCAAATGAGTTGTACaagcttttacatttaattataaGCCATGCATATTGGTTGAAAAGCCCCCTGTTGTTTCAAAGGAACGTGGCCTCAAGGGCTGATAAGATAGGATCCCTTTGCCAAGTGGGGTCATTTAGAATGTGCAGACACCGGTTTATTCAAAGGTGGCCCTTTTATCTCTCAACTGGGTCAGTAGTTTAAATGCAGTGATTTGTATTTACTTAAGAAAATATGAttgacccctttcacattgtcatttcatacattgttaataaaatattaattatagCTGCTTTAGGGATTTCACACAGATAAAAATGTAATGACAAATGTTTCGAATAACATCACTGAGTAAAATGTAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU263261 True 2114 lncRNA 0.33 1 14818850 14820963

Neighbor

gene id symbol gene type direction distance location
LOC120548334 LOC103360893,LOC104956651,LOC100701060,LOC102788577 coding upstream 1514 14769458 ~ 14817336 (+)
smndc1 smndc1 coding upstream 101658 14694920 ~ 14717192 (+)
ppp2r2d ppp2r2d coding upstream 130799 14683067 ~ 14688051 (+)
mgmt mgmt coding upstream 223190 14575718 ~ 14595660 (+)
gnrh3 LOC104956640,LOC103357677 coding upstream 306493 14511200 ~ 14512357 (+)
LOC120548312 neurl1,LOC103360891,LOC104929534 coding downstream 109612 14930575 ~ 14959263 (+)
slka slk coding downstream 198582 15019545 ~ 15041272 (+)
sfr1 sfr1 coding downstream 255640 15076603 ~ 15077961 (+)
LOC120548156 LOC101486407,LOC100696412,LOC102210308,LOC102297040,LOC100699992 coding downstream 274805 15095768 ~ 15098983 (+)
LOC120547654 NA coding downstream 283841 15104804 ~ 15105718 (+)
G193847 NA non-coding upstream 126754 14691351 ~ 14692096 (+)
G193837 NA non-coding upstream 307930 14509599 ~ 14510920 (+)
G193709 NA non-coding upstream 846735 13971790 ~ 13972115 (+)
G193701 NA non-coding upstream 872499 13946073 ~ 13946351 (+)
G193661 NA non-coding upstream 1064054 13752743 ~ 13754796 (+)
LOC120548320 NA non-coding downstream 87650 14908613 ~ 14909362 (+)
G193907 NA non-coding downstream 90509 14911472 ~ 14911724 (+)
G193909 NA non-coding downstream 101382 14922345 ~ 14922560 (+)
G193928 NA non-coding downstream 228816 15049779 ~ 15053382 (+)
G193934 NA non-coding downstream 245389 15066352 ~ 15067060 (+)
G193730 mettl10 other upstream 742393 14074642 ~ 14076457 (+)
chrm3a LOC101465548 other upstream 1609640 13123018 ~ 13209210 (+)
LOC120548560 plekha1,LOC103359314,LOC101483871,LOC102289782,LOC102791929,LOC104931082 other upstream 2445579 12351323 ~ 12373271 (+)
sf3b5 sf3b5 other upstream 2528320 12287013 ~ 12290530 (+)
oprm1 LOC104946549,LOC106536872,LOC107375811 other upstream 2540475 12246951 ~ 12278375 (+)
zgc:91976 sgms1 other downstream 388876 15209839 ~ 15233875 (+)
LOC120548468 NA other downstream 974007 15794970 ~ 15803515 (+)
lrmda clg13h10orf11,LOC102312243,LOC101474007,LOC106515339,LOC102208092 other downstream 1091799 15912762 ~ 16129667 (+)
G194185 NA other downstream 1532228 16353191 ~ 16353831 (+)
trmt2b trmt2b other downstream 1799061 16620024 ~ 16625097 (+)

Expression


Co-expression Network