LOC120547654


Basic Information

Item Value
gene id LOC120547654
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 15104804 ~ 15105718 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039783184.1
ACTGCAGAGATGACAAACTCAGAAGCCACCGAGATGTTCTGTTTGCAGATTCTTTGGGACTGGTTAAGACATCAGAGCTTCCTCAGATCTCCTTTTTTCCCAGTTGTCTTCTCTCTGACAGTTTACCTGAGCTGCTGCTTGCCTTTTGTTTGTCTGGATTTGCTCTGTTCCAGACTGACCCTGGTGCGCCGCTTCAAGATCCAGCCTCAAAGCGAGGTCACATGGCCAATGGCTTGCAGGTGCTTGTGCAAAATTCTCCACAACCATGTCTTTTTcattttccctctttctgttgTATACTGGCACTGGAGGCCTGTGTTTTTTCCTCCACTGGCACCTGAGATGCTGTCTGTTGTTACGGACATACTAGCCTGCCTCCTCCTGTTTGACATGCAGTACTTTTTGTGGCATCTGCTACATCACAAGGTGTTGTGGCTCTACCGTTTCTTCCACAAGGAGCACCACCTCTACACGGTCACCTTCTCTCTggcaacagaaaacacaggggtcTGGGAGATGCTGAGCCTCGCCTTCTTTGCAGCTCTGAACCCTGCCCTCCTGGACTGCCATCCACTCACAGAGATGCTCTTCTTTGTCACAAACATGTATCTGTCTGTGGAGGCGCACTCTGGCTATGAATTCCCCTGGTCTCCACATAGACTGGTGCCCTTTGGCCTCTACGGAGGAGCCAGGCATCATGACCTCCACCACCTCAAATTCAAAGTAAACTACGCACCGTACTTCACACACTGGGACATACTTCTTGGCACGCTCCAGGGAGTACGGAGGAGGTAAAGGAAGACTTCAAATAGATCATGATTGTCAGAATATGTGAAGGACATTTTGTGCTGCTGTTAACCTGCAAAGAAAGGCTACTAATGATTTACCTTTGGTGCTGACATTTTCAAAGTTCAG

Function

GO: NA

KEGG:

id description
K10223 CH25H; cholesterol 25-hydroxylase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039783184.1 True 915 mRNA 0.49 1 15104804 15105718

Neighbor

gene id symbol gene type direction distance location
LOC120548156 LOC101486407,LOC100696412,LOC102210308,LOC102297040,LOC100699992 coding upstream 5821 15095768 ~ 15098983 (+)
sfr1 sfr1 coding upstream 26843 15076603 ~ 15077961 (+)
slka slk coding upstream 63532 15019545 ~ 15041272 (+)
LOC120548312 neurl1,LOC103360891,LOC104929534 coding upstream 145541 14930575 ~ 14959263 (+)
LOC120548334 LOC103360893,LOC104956651,LOC100701060,LOC102788577 coding upstream 287468 14769458 ~ 14817336 (+)
LOC120548216 prkg1,LOC103355670,LOC100694992,LOC101466538,LOC103476798 coding downstream 143482 15249200 ~ 15337542 (+)
LOC120548217 dkk1 coding downstream 234409 15340127 ~ 15342013 (+)
plek plek coding downstream 519599 15625317 ~ 15632128 (+)
LOC120547683 bfsp1,LOC102795616 coding downstream 559649 15665367 ~ 15678608 (+)
gtpbp2a gtpbp2,LOC106513626 coding downstream 664177 15769895 ~ 15777416 (+)
G193935 NA non-coding upstream 31494 15072898 ~ 15073310 (+)
G193934 NA non-coding upstream 37744 15066352 ~ 15067060 (+)
G193928 NA non-coding upstream 51422 15049779 ~ 15053382 (+)
G193909 NA non-coding upstream 182244 14922345 ~ 14922560 (+)
G193907 NA non-coding upstream 193080 14911472 ~ 14911724 (+)
LOC120548564 NA non-coding downstream 21089 15126807 ~ 15129135 (+)
LOC120547672 NA non-coding downstream 31910 15137628 ~ 15143595 (+)
G193947 pten,LOC104929647,LOC103360879 non-coding downstream 52664 15158382 ~ 15159669 (+)
G193957 papss2,LOC103355675 non-coding downstream 63888 15169606 ~ 15171642 (+)
G194119 NA non-coding downstream 715307 15821025 ~ 15823765 (+)
G193730 mettl10 other upstream 1028347 14074642 ~ 14076457 (+)
chrm3a LOC101465548 other upstream 1895594 13123018 ~ 13209210 (+)
LOC120548560 plekha1,LOC103359314,LOC101483871,LOC102289782,LOC102791929,LOC104931082 other upstream 2731533 12351323 ~ 12373271 (+)
sf3b5 sf3b5 other upstream 2814274 12287013 ~ 12290530 (+)
oprm1 LOC104946549,LOC106536872,LOC107375811 other upstream 2826429 12246951 ~ 12278375 (+)
zgc:91976 sgms1 other downstream 104121 15209839 ~ 15233875 (+)
LOC120548468 NA other downstream 689252 15794970 ~ 15803515 (+)
lrmda clg13h10orf11,LOC102312243,LOC101474007,LOC106515339,LOC102208092 other downstream 807044 15912762 ~ 16129667 (+)
G194185 NA other downstream 1247473 16353191 ~ 16353831 (+)
trmt2b trmt2b other downstream 1514306 16620024 ~ 16625097 (+)

Expression


Co-expression Network