gnrh3 (LOC104956640,LOC103357677)


Basic Information

Item Value
gene id gnrh3
gene name LOC104956640,LOC103357677
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 14511200 ~ 14512357 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039784648.1
CAGAGCTCTAATGGAAGCAAGCAGCAGAGTGATGGTGCAGGTGTTGGTGTTGGCGTTGGTGTTCCAGGTCACCCTGTCACAGCACTGGTCCTATGGATGGTTACCAGGTGGAAAAAGAAGTGTGGGGGAGCTGGAGGCAACCATCAGGATGATGGGTACAGGAGGAGTGGTGTCTCTTCCCGAAGAGGCGAGTGCCCAGACCCAAGAGAGACTGAGACCATACAATGTAATCAATGATGATTACAGTCATTTTGACCGAAAGAGAAGGTTCCCTAATAATTGAAGAgctacaaaaaagaaagaaagaaaaaaaaacacggaCTGTATTTGCGTCTTCATCTACAACAGTGATGGATCGCCCGGGTGCAGGATACTGACTTCAACAAATCATCACATTTATTGCACCGATCAATTCCATGTA

Function

NR:

description
gonadotropin-releasing hormone precursor II isoform A

GO:

id name namespace
GO:0007275 multicellular organism development biological_process
GO:0005576 extracellular region cellular_component
GO:0005179 hormone activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039784648.1 True 421 mRNA 0.47 4 14511200 14512357

Neighbor

gene id symbol gene type direction distance location
LOC120548387 ptpre,LOC103357678,LOC104929420 coding upstream 1780 14486130 ~ 14509420 (+)
edrf1 edrf1 coding upstream 287261 14211177 ~ 14223939 (+)
zranb1b LOC103364011,LOC100705114 coding upstream 380942 14107531 ~ 14130258 (+)
abraxas2 fam175b coding upstream 404422 14090227 ~ 14106778 (+)
LOC120547617 LOC104928877,LOC103364007,LOC104955506,LOC102779318,LOC101473811 coding upstream 540628 13964300 ~ 13970572 (+)
mgmt mgmt coding downstream 63361 14575718 ~ 14595660 (+)
ppp2r2d ppp2r2d coding downstream 170710 14683067 ~ 14688051 (+)
smndc1 smndc1 coding downstream 182563 14694920 ~ 14717192 (+)
LOC120548334 LOC103360893,LOC104956651,LOC100701060,LOC102788577 coding downstream 257101 14769458 ~ 14817336 (+)
LOC120548312 neurl1,LOC103360891,LOC104929534 coding downstream 418218 14930575 ~ 14959263 (+)
G193837 NA non-coding upstream 280 14509599 ~ 14510920 (+)
G193709 NA non-coding upstream 539085 13971790 ~ 13972115 (+)
G193701 NA non-coding upstream 564849 13946073 ~ 13946351 (+)
G193661 NA non-coding upstream 756404 13752743 ~ 13754796 (+)
G193395 NA non-coding upstream 1578346 12857800 ~ 12932854 (+)
G193847 NA non-coding downstream 178994 14691351 ~ 14692096 (+)
G193902 NA non-coding downstream 306493 14818850 ~ 14820963 (+)
LOC120548320 NA non-coding downstream 396256 14908613 ~ 14909362 (+)
G193907 NA non-coding downstream 399115 14911472 ~ 14911724 (+)
G193909 NA non-coding downstream 409988 14922345 ~ 14922560 (+)
G193730 mettl10 other upstream 434743 14074642 ~ 14076457 (+)
chrm3a LOC101465548 other upstream 1301990 13123018 ~ 13209210 (+)
LOC120548560 plekha1,LOC103359314,LOC101483871,LOC102289782,LOC102791929,LOC104931082 other upstream 2137929 12351323 ~ 12373271 (+)
sf3b5 sf3b5 other upstream 2220670 12287013 ~ 12290530 (+)
oprm1 LOC104946549,LOC106536872,LOC107375811 other upstream 2232825 12246951 ~ 12278375 (+)
zgc:91976 sgms1 other downstream 697482 15209839 ~ 15233875 (+)
LOC120548468 NA other downstream 1282613 15794970 ~ 15803515 (+)
lrmda clg13h10orf11,LOC102312243,LOC101474007,LOC106515339,LOC102208092 other downstream 1400405 15912762 ~ 16129667 (+)
G194185 NA other downstream 1840834 16353191 ~ 16353831 (+)
trmt2b trmt2b other downstream 2107667 16620024 ~ 16625097 (+)

Expression


Co-expression Network