RNA id: XM_039784648.1


Basic Information

Item Value
RNA id XM_039784648.1
length 421
RNA type mRNA
GC content 0.47
exon number 4
gene id gnrh3
representative True

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 14511200 ~ 14512357 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CAGAGCTCTAATGGAAGCAAGCAGCAGAGTGATGGTGCAGGTGTTGGTGTTGGCGTTGGTGTTCCAGGTCACCCTGTCACAGCACTGGTCCTATGGATGGTTACCAGGTGGAAAAAGAAGTGTGGGGGAGCTGGAGGCAACCATCAGGATGATGGGTACAGGAGGAGTGGTGTCTCTTCCCGAAGAGGCGAGTGCCCAGACCCAAGAGAGACTGAGACCATACAATGTAATCAATGATGATTACAGTCATTTTGACCGAAAGAGAAGGTTCCCTAATAATTGAAGAgctacaaaaaagaaagaaagaaaaaaaaacacggaCTGTATTTGCGTCTTCATCTACAACAGTGATGGATCGCCCGGGTGCAGGATACTGACTTCAACAAATCATCACATTTATTGCACCGATCAATTCCATGTA

Function

GO:

id name namespace
GO:0007275 multicellular organism development biological_process
GO:0005576 extracellular region cellular_component
GO:0005179 hormone activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU263180 lncRNA upstream 280 14509599 ~ 14510920 (+) True G193837
TU263025 lncRNA upstream 539085 13971790 ~ 13972115 (+) True G193709
TU263017 lncRNA upstream 564849 13946073 ~ 13946351 (+) True G193701
TU262976 lncRNA upstream 756404 13753553 ~ 13754796 (+) False G193661
TU262975 lncRNA upstream 756460 13752743 ~ 13754740 (+) True G193661
TU263196 lncRNA downstream 178994 14691351 ~ 14692096 (+) True G193847
TU263261 lncRNA downstream 306493 14818850 ~ 14820963 (+) True G193902
XR_005637167.1 lncRNA downstream 396256 14908613 ~ 14909362 (+) True LOC120548320
TU263266 lncRNA downstream 399115 14911472 ~ 14911724 (+) True G193907
TU263268 lncRNA downstream 409988 14922345 ~ 14922560 (+) True G193909
XM_039784645.1 mRNA upstream 1780 14486130 ~ 14509420 (+) True LOC120548387
XM_039784646.1 mRNA upstream 1780 14486130 ~ 14509420 (+) False LOC120548387
XM_039784647.1 mRNA upstream 1780 14500688 ~ 14509420 (+) False LOC120548387
XM_039783611.1 mRNA upstream 287261 14211177 ~ 14223939 (+) True edrf1
XM_039784622.1 mRNA upstream 380942 14107531 ~ 14130258 (+) True zranb1b
XM_039784920.1 mRNA downstream 63361 14575718 ~ 14595660 (+) False mgmt
XM_039784917.1 mRNA downstream 63368 14575725 ~ 14595660 (+) True mgmt
XM_039784918.1 mRNA downstream 63368 14575725 ~ 14595660 (+) False mgmt
XM_039784916.1 mRNA downstream 63368 14575725 ~ 14595660 (+) False mgmt
XM_039784919.1 mRNA downstream 63368 14575725 ~ 14595660 (+) False mgmt
TU263049 other upstream 434743 14074642 ~ 14076457 (+) True G193730
XR_005637191.1 other upstream 2139930 12351324 ~ 12371270 (+) False LOC120548560
TU263682 other downstream 1840834 16353191 ~ 16353831 (+) True G194185
TU263878 other downstream 2377043 16889400 ~ 16890950 (+) True G194325
XR_005637204.1 other downstream 4056626 18568983 ~ 18569123 (+) True LOC120548592
TU264570 other downstream 4168632 18680989 ~ 18682296 (+) False prdm8
TU264674 other downstream 4332073 18844430 ~ 18850903 (+) True G194908

Expression Profile