Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120548168 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053130.1 |
| NCBI id | CM020927.1 |
| chromosome length | 36824488 |
| location | 2177872 ~ 2185585 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005637146.1 | True | 555 | lncRNA | 0.48 | 3 | 2177872 | 2185585 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnat-agu_15 | NA | coding | upstream | 56407 | 2121392 ~ 2121465 (+) |
| trnat-agu_14 | NA | coding | upstream | 59052 | 2118747 ~ 2118820 (+) |
| LOC120547899 | LOC102301710,LOC107396804,LOC100696318 | coding | upstream | 66001 | 2006144 ~ 2111871 (+) |
| LOC120548117 | LOC103362069,LOC108229017,LOC106525817,LOC101169632,LOC101471088,LOC100695262 | coding | downstream | 7715 | 2193300 ~ 2200457 (+) |
| rps27a | rps27a | coding | downstream | 319182 | 2504767 ~ 2508381 (+) |
| LOC120548433 | NA | coding | downstream | 343595 | 2529180 ~ 2637276 (+) |
| LOC120548306 | NA | coding | downstream | 472272 | 2657857 ~ 2663678 (+) |
| LOC120548310 | NA | coding | downstream | 643474 | 2829059 ~ 2829748 (+) |
| G191218 | NA | non-coding | upstream | 24479 | 2090115 ~ 2153393 (+) |
| G191240 | NA | non-coding | upstream | 24936 | 2125202 ~ 2152936 (+) |
| G191213 | NA | non-coding | upstream | 60801 | 2101708 ~ 2117071 (+) |
| G191233 | NA | non-coding | upstream | 143816 | 2021693 ~ 2034056 (+) |
| G191214 | NA | non-coding | upstream | 177828 | 1999191 ~ 2000044 (+) |
| G191246 | NA | non-coding | downstream | 13829 | 2199414 ~ 2199653 (+) |
| G191242 | NA | non-coding | downstream | 24448 | 2210033 ~ 2229106 (+) |
| G191270 | NA | non-coding | downstream | 79921 | 2265506 ~ 2390590 (+) |
| G191274 | NA | non-coding | downstream | 84045 | 2269630 ~ 2270193 (+) |
| G191276 | NA | non-coding | downstream | 108532 | 2294117 ~ 2301273 (+) |
| G191236 | NA | other | upstream | 73175 | 2047957 ~ 2104697 (+) |
| G191230 | NA | other | upstream | 173644 | 2002812 ~ 2004228 (+) |
| G191212 | NA | other | upstream | 228638 | 1948390 ~ 1949234 (+) |
| G190785 | NA | other | upstream | 397890 | 1701556 ~ 1779982 (+) |
| G190758 | NA | other | upstream | 562326 | 1581834 ~ 1615546 (+) |
| LOC120548303 | usp54,LOC106455943,LOC108247408,LOC104941643,LOC107104721 | other | downstream | 83243 | 2268828 ~ 2316402 (+) |
| G191565 | sptbn1 | other | downstream | 570569 | 2756154 ~ 2761679 (+) |
| G191567 | sptbn1 | other | downstream | 576465 | 2762050 ~ 2766062 (+) |
| G191571 | NA | other | downstream | 585048 | 2770633 ~ 3018448 (+) |
| G191573 | sptbn1,LOC107396444 | other | downstream | 589723 | 2775308 ~ 2778367 (+) |
