trnat-agu_15


Basic Information

Item Value
gene id trnat-agu_15
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 2121392 ~ 2121465 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_1105
GGTGCTGTGGCTTAGCTGGTTAAAGCGCCTGTCTAGTAAACAGGAggtcctgggttcaaatcccagcagcGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_1105 True 74 tRNA 0.55 1 2121392 2121465

Neighbor

gene id symbol gene type direction distance location
trnat-agu_14 NA coding upstream 2572 2118747 ~ 2118820 (+)
LOC120547899 LOC102301710,LOC107396804,LOC100696318 coding upstream 9521 2006144 ~ 2111871 (+)
trnat-agu_12 NA coding upstream 68391 2052927 ~ 2053001 (+)
trnat-ugu_6 NA coding upstream 75573 2045746 ~ 2045819 (+)
LOC120547583 opn4,LOC107372404 coding upstream 130578 1972182 ~ 1990814 (+)
LOC120548117 LOC103362069,LOC108229017,LOC106525817,LOC101169632,LOC101471088,LOC100695262 coding downstream 71835 2193300 ~ 2200457 (+)
rps27a rps27a coding downstream 383302 2504767 ~ 2508381 (+)
LOC120548433 NA coding downstream 407715 2529180 ~ 2637276 (+)
LOC120548306 NA coding downstream 536392 2657857 ~ 2663678 (+)
LOC120548310 NA coding downstream 707594 2829059 ~ 2829748 (+)
G191213 NA non-coding upstream 4321 2101708 ~ 2117071 (+)
G191233 NA non-coding upstream 87336 2021693 ~ 2034056 (+)
G191214 NA non-coding upstream 121348 1999191 ~ 2000044 (+)
G191229 NA non-coding upstream 135642 1985439 ~ 1985750 (+)
G191227 NA non-coding upstream 137797 1972658 ~ 1983595 (+)
G191240 NA non-coding downstream 3737 2125202 ~ 2152936 (+)
G191241 NA non-coding downstream 17417 2138882 ~ 2192858 (+)
G191245 NA non-coding downstream 23208 2144673 ~ 2233390 (+)
G191219 NA non-coding downstream 24293 2145758 ~ 2207417 (+)
LOC120548168 NA non-coding downstream 56407 2177872 ~ 2185585 (+)
G191236 NA other upstream 16695 2047957 ~ 2104697 (+)
G191230 NA other upstream 117164 2002812 ~ 2004228 (+)
G191212 NA other upstream 172158 1948390 ~ 1949234 (+)
G190785 NA other upstream 341410 1701556 ~ 1779982 (+)
G190758 NA other upstream 505846 1581834 ~ 1615546 (+)
LOC120548303 usp54,LOC106455943,LOC108247408,LOC104941643,LOC107104721 other downstream 147363 2268828 ~ 2316402 (+)
G191565 sptbn1 other downstream 634689 2756154 ~ 2761679 (+)
G191567 sptbn1 other downstream 640585 2762050 ~ 2766062 (+)
G191571 NA other downstream 649168 2770633 ~ 3018448 (+)
G191573 sptbn1,LOC107396444 other downstream 653843 2775308 ~ 2778367 (+)

Expression


Co-expression Network