LOC120549207


Basic Information

Item Value
gene id LOC120549207
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 27895 ~ 50886 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU269994
TGAAGCATTAAATACGCCCTGTTCCACATTCTGTATCACACATTTTGTGGGAACAGAATGAAAAACTCTATTTATCTGTGGCCAGGTACCTTAGATATTACTACTCTGTTAGATTGCAAAATTAttagtatgtgtatgtgtagtaTGTGATTAGTATGATGGAAATACAATTGAGGGAAACAGTTGTTTCACAATGGTGAAGCAACATTGGTTCACAAATGGTTTCTTTCTGGATAAAGATTACTGTCAGCCGGTGTAGGAGCCAAAGCCCTACTCACTGAAATAATTCCAAAATGGAGAATTCCTACCAAAATCTCAAGTATAGTGGTTTGCATTCAAAATGCAACATGCATACATTTGACAAAAGCTCTGCTTATTGTACTGAGGTATAGAATGTGCACGCGCAAGCGACTTAACCTGTCACCCTTTTTTGAGATTTTGTTTACAGCACCTCCACACATTGGACTTGGGTAAGGAGGACACCCACCAGACACACCACTGTGTGAGCACCAAATGcagatacTTTGAGGCGTGGTTGAACTGGCTACCTCCGCTGGTGAATCCTGAGCATTATACTGCATAAGAACTGTAAGATGAGTGTATTTACATGAgatgattttatttaaatagtggt
>TU269995
GAGCGGTGCACTCCCATGGTAGCTACCATTGGGAGAGAGGAGCAGCTGTGTCCTGTTGCTACACACGAAAGGCACGAAGCTGTCGTGTGTTAACAGCAAGACACATTTGAAACGCGGTCGACAAGTTTCCTCAGACAAGACTTCAGAGGCAAATCAGAGAGACCACAGAAACTCCGCTGGCCGAGCTTCCAGAACTCCCATCGGCCCAGCTCCAGATTAGCTGCCAGTCTGTGCTACAGATGAATCTACTCCAGAAGCTCTCCCTGCTGCAGCTCACTGCTCTGCTGGAGAGACACACCCCTACAAACAAACATGGCTTTAGCTGGGCTGTGCCAAGGTTTATGAAGCGGATCAAGGTGCGTGAATATGTTCGGTGTGCCACTACAAGTCATCGTCCAGCGGACAGGCCAGCCCCTCCCTCAGGGCATTCAGCAGGCCATGCGCTATTTACGCAGCCAGTGTCTCGACCAGATCCCAGGGGAGATGAATCGCTGCAGGAACTCTTATGTGGAGCAGGCGCTGCTGTCGCGATGGCTGGAGGACCTCTCCGGGGACAGAGAACAAAACTTgtccctctgtttgactgagtcCAAAAGCTGATAAGGAAGACACACAGCCCTTACCAGAGAAACAGACTCTGTTGGACGGACAGC
>XR_005637348.1
CACAGGCAGATTAGAGCGGTGCACTCCCATGGTAGCTACCATTGGGAGAGAGGAGCAGCTGTGTCCTGTTGCTACACACGAAAGGCACGAAGCTGTCGTGTGTTAACAGCAAGACACATTTGAAACGCGGTCGACAAGTTTCCTCAGACAAGACTTCAGAGGCAAATCAGAGAGACCACAGAAACTCCGCTGGCCGAGCTTCCAGAACTCCCATCGGCCCAGCTCCAGATTAGCTGCCAGTCTGTGCTACAGATGAATCTACTCCAGAAGCTCTCCCTGCTGCAGCTCACTGCTCTGCTGGAGAGACACACCCCTACAAACAAACATGGCTTTAGCTGGGCTGTGCCAAGGTTTATGAAGCGGATCAAGGTGCGTGAATATGTTCGGTGTGCCACTACAAGTCATCGTCCAGCGGACAGGCCAGCCCCTCCCTCAGGGCATTCAGCAGGCCATGCGCTATTTACGCAGCCAGTGTCTCGACCAGATCCCAGGGGAGATGAATCGCTGCAGGAACTCTTATGTGGAGCAGGCGCTGCTGTCGCGATGGCTGGAGGACCTCTCCGGGGACAGAGAACAAAACTTgtccctctgtttgactgagtcCAAAAGCTGATAAGGAAGATTTTGTTTACAGCACCTCCACACATTGGACTTGGGTAAGGAGGACACCCACCAGACACACCACTGTGTGAGCACCAAATGcagatacTTTGAGGCGTGGTTGAACTGGCTACCTCCGCTGGTGAATCCTGAGCATTATACTGCATAAGAACTGTAAGATGAGTGTATTTACATGAgatgattttatttaaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU269994 False 634 lncRNA 0.39 2 33993 35120
TU269995 False 653 TUCP 0.54 6 27908 50886
XR_005637348.1 True 814 lncRNA 0.52 7 27895 35114

Neighbor

gene id symbol gene type direction distance location
LOC120549546 NA coding upstream 24574 2117 ~ 3321 (+)
LOC120549201 NA coding downstream 3030 53916 ~ 55594 (+)
LOC120549549 NA coding downstream 7086 57972 ~ 62170 (+)
LOC120549203 NA coding downstream 70117 121003 ~ 122553 (+)
LOC120550022 NA coding downstream 202694 253580 ~ 253743 (+)
LOC120550038 NA coding downstream 203336 254222 ~ 254383 (+)
G199137 NA non-coding downstream 135221 186107 ~ 186390 (+)
G199138 NA non-coding downstream 137930 188816 ~ 189174 (+)
G199139 NA non-coding downstream 144075 194961 ~ 195386 (+)
G199143 NA non-coding downstream 166997 217883 ~ 226164 (+)
G199178 NA non-coding downstream 331131 382017 ~ 382370 (+)
G199306 NA other downstream 912223 963109 ~ 992012 (+)
LOC120549526 NA other downstream 1048698 1099584 ~ 1101404 (+)
G199564 NA other downstream 2108004 2158890 ~ 2159383 (+)
G199652 NA other downstream 2497099 2547985 ~ 2548539 (+)
G199689 NA other downstream 2641587 2692473 ~ 2693453 (+)

Expression


Co-expression Network