LOC120549526


Basic Information

Item Value
gene id LOC120549526
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 1099584 ~ 1101404 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU270323
CACCGGTACACACACCTGGCTAACAGGACAGACAAAAGATCCGTTCGCTTGGTCCCAAATTCGAACTGAAATACTGCCATTGGCTAAAACCTATGTTGACTACACTTCACCGACGGTGTTATAACGCAAGGTAGGACGAAGATACCAAGAAGGACATTGTCGGCTGTCAACAGTAAAGACTTTCCTCCGCTCAAGACTGCTAGCCCGTATGCTAACGCGGGAAACAAGTTAGCTTTCCACAGCTAGCTAAGCTGCTAGCCCTAGTATGGAGGATACATCAAAGTTGGCCACAGAGACTGAACCTTCCCTCGGTGATGTTTTAACCACCATAAGGAACCTGGACAACAAGatgaaTCCATTCCACAAGCAAGAAAGCATTTCAGGACAGAGTCCATGAGGACCTCGCATTACCCGCATGGCACAGCGGATGGACACatttgaggaaaagatggatgaGCTGCTCATGCTCTTAAGGAGCTCCCAGTCACCTCCCTCTGCTCCAGTCGATGACGTGTTGCTGTCGCCCTGCTCAACAGTCATCGAGCTGCAGGAGTtcaacaggagaggaggaacaaAATGCGGCCTCTCAGAAAAACTGCCcgctgactgcagcagacgtggagGACCCCCAGTGCTCCCCCTCACAATATCCAACAGCCTAGTGTCAAAGGTCGACTCATTCAAGTTTCTGGGCTCCATCATTTCCCAGGACCTGAAGAGGGAGTCCA
>XR_005637399.1
CTTCACCGACGGTGTTATAACGCAAGGTAGGACGAAGATACCAAGAAGGACATTGTCGGCTGTCAACAGTAAAGACTTTCCTCCGCTCAAGACTGCTAGCCCGTATGCTAACGCGGGAAACAAGTTAGCTTTCCACAGCTAGCTAAGCTGCTAGCCCTAGTATGGAGGATACATCAAAGTTGGCCACAGAGACTGAACCTTCCCTCGGTGATGTTTTAACCACCATAAGGAACCTGGACAACAAGatgaaTCCATTCCACAAGCAAGAAAGCATTTCAGGACAGAGTCCATGAGGACCTCGCATTACCCGCATGGCACAGCGGATGGACACatttgaggaaaagatggatgaGCTGCTCATGCTCTTAAGGAGCTCCCAGTCACCTCCCTCTGCTCCAGTCGATGACGTGTTGCTGTCGCCCTGCTCAACAGTCATCGAGCTGCAGGAGTtcaacaggagaggaggaacaaAATGcaacttttTCTGACAACCTTTCAACCAATGACGTTGTAAAACTGTATAGCCTGCAGGGCAGAAAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU270323 True 728 TUCP 0.51 4 1099584 1101404
XR_005637399.1 False 542 lncRNA 0.49 4 1099688 1101116

Neighbor

gene id symbol gene type direction distance location
LOC120548863 LOC107574244 coding upstream 98160 996621 ~ 1001424 (+)
LOC120549204 LOC104922054 coding upstream 441511 656330 ~ 658073 (+)
trnav-aac_28 NA coding upstream 628862 470650 ~ 470722 (+)
LOC120549579 NA coding upstream 672049 425361 ~ 427535 (+)
LOC120550040 NA coding upstream 833624 265798 ~ 265960 (+)
LOC120550151 NA coding downstream 308620 1410024 ~ 1410142 (+)
LOC120550347 NA coding downstream 308844 1410248 ~ 1410366 (+)
LOC120550237 NA coding downstream 309289 1410693 ~ 1410810 (+)
LOC120550358 NA coding downstream 309511 1410915 ~ 1411033 (+)
LOC120550545 NA coding downstream 309734 1411138 ~ 1411256 (+)
LOC120549567 NA non-coding upstream 10101 1088805 ~ 1089483 (+)
G199351 NA non-coding upstream 20834 1073845 ~ 1078750 (+)
G199349 NA non-coding upstream 30469 1068787 ~ 1069115 (+)
G199344 NA non-coding upstream 35628 1063707 ~ 1063956 (+)
G199331 NA non-coding upstream 66473 1032584 ~ 1033111 (+)
G199369 NA non-coding downstream 16683 1118087 ~ 1118386 (+)
G199375 NA non-coding downstream 31696 1133100 ~ 1133354 (+)
G199377 NA non-coding downstream 34521 1135925 ~ 1136527 (+)
LOC120549594 NA non-coding downstream 196525 1297929 ~ 1298395 (+)
LOC120549593 NA non-coding downstream 196997 1298401 ~ 1299167 (+)
G199306 NA other upstream 107572 963109 ~ 992012 (+)
LOC120549207 NA other upstream 1048698 27895 ~ 50886 (+)
G199564 NA other downstream 1057486 2158890 ~ 2159383 (+)
G199652 NA other downstream 1446581 2547985 ~ 2548539 (+)
G199689 NA other downstream 1591069 2692473 ~ 2693453 (+)
G199885 NA other downstream 2394676 3496080 ~ 3523889 (+)
LOC120549013 NA other downstream 3921254 5022658 ~ 5024934 (+)

Expression


Co-expression Network