LOC120549567


Basic Information

Item Value
gene id LOC120549567
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 1088805 ~ 1089483 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005637405.1
GCTTCACAACCTAGACTGGAGCAAGATGTTTCAGAGTGgtGTACTTGTGGAAATTGCTCGACAATGTCCACTGAAGTTGAAAACATCTGTTGCCAAGAAATACAAATGgttGTTACACAAATGCAACAGGTTCCTGTCCCACCTACCTGCATGGTTTACCATCCAGACCTAGAGCCAACCTGTTTGAACCACTACACCCTGCGGAACATCTACACTATATACAGAGCAGACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005637405.1 True 232 lncRNA 0.45 3 1088805 1089483

Neighbor

gene id symbol gene type direction distance location
LOC120548863 LOC107574244 coding upstream 87381 996621 ~ 1001424 (+)
LOC120549204 LOC104922054 coding upstream 430732 656330 ~ 658073 (+)
trnav-aac_28 NA coding upstream 618083 470650 ~ 470722 (+)
LOC120549579 NA coding upstream 661270 425361 ~ 427535 (+)
LOC120550040 NA coding upstream 822845 265798 ~ 265960 (+)
LOC120550151 NA coding downstream 320541 1410024 ~ 1410142 (+)
LOC120550347 NA coding downstream 320765 1410248 ~ 1410366 (+)
LOC120550237 NA coding downstream 321210 1410693 ~ 1410810 (+)
LOC120550358 NA coding downstream 321432 1410915 ~ 1411033 (+)
LOC120550545 NA coding downstream 321655 1411138 ~ 1411256 (+)
G199351 NA non-coding upstream 10055 1073845 ~ 1078750 (+)
G199349 NA non-coding upstream 19690 1068787 ~ 1069115 (+)
G199344 NA non-coding upstream 24849 1063707 ~ 1063956 (+)
G199331 NA non-coding upstream 55694 1032584 ~ 1033111 (+)
G199307 NA non-coding upstream 122307 963804 ~ 966498 (+)
G199369 NA non-coding downstream 28604 1118087 ~ 1118386 (+)
G199375 NA non-coding downstream 43617 1133100 ~ 1133354 (+)
G199377 NA non-coding downstream 46442 1135925 ~ 1136527 (+)
LOC120549594 NA non-coding downstream 208446 1297929 ~ 1298395 (+)
LOC120549593 NA non-coding downstream 208918 1298401 ~ 1299167 (+)
G199306 NA other upstream 96793 963109 ~ 992012 (+)
LOC120549207 NA other upstream 1037919 27895 ~ 50886 (+)
LOC120549526 NA other downstream 10101 1099584 ~ 1101404 (+)
G199564 NA other downstream 1069407 2158890 ~ 2159383 (+)
G199652 NA other downstream 1458502 2547985 ~ 2548539 (+)
G199689 NA other downstream 1602990 2692473 ~ 2693453 (+)
G199885 NA other downstream 2406597 3496080 ~ 3523889 (+)

Expression


Co-expression Network