Gene
RNA
| Item | Value |
|---|---|
| gene id | G203839 |
| gene name | LOC102197808,LOC102078936,LOC102785566,LOC101472868,LOC108425642,LOC101175281 |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053131.1 |
| NCBI id | CM020928.1 |
| chromosome length | 36057207 |
| location | 18190193 ~ 18191322 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| description |
|---|
| PREDICTED: interphotoreceptor matrix proteoglycan 1-like isoform X5 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU276126 | True | 244 | lncRNA | 0.59 | 2 | 18190193 | 18191322 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cga | cga | coding | downstream | 97290 | 18084728 ~ 18092903 (-) |
| orc3 | orc3 | coding | downstream | 119241 | 18062380 ~ 18070952 (-) |
| LOC120549322 | pm20d2,LOC102780682 | coding | downstream | 153612 | 18023121 ~ 18036581 (-) |
| tonsl | tonsl | coding | downstream | 180246 | 17996563 ~ 18009947 (-) |
| si:ch211-15d5.11 | NA | coding | downstream | 264736 | 17910172 ~ 17925457 (-) |
| myo6b | LOC103377973 | coding | upstream | 2774 | 18194096 ~ 18233326 (-) |
| cmpk2 | cmpk2 | coding | upstream | 474903 | 18666225 ~ 18670694 (-) |
| kidins220a | NA | coding | upstream | 764720 | 18956042 ~ 19003463 (-) |
| mboat2a | mboat2,LOC103371588,LOC100698509 | coding | upstream | 812997 | 19004319 ~ 19051560 (-) |
| LOC120548926 | NA | coding | upstream | 953593 | 19144915 ~ 19145943 (-) |
| G203828 | NA | non-coding | downstream | 25618 | 18164352 ~ 18164575 (-) |
| G203749 | NA | non-coding | downstream | 204101 | 17977781 ~ 17986092 (-) |
| G203705 | NA | non-coding | downstream | 301717 | 17887505 ~ 17888476 (-) |
| G203701 | NA | non-coding | downstream | 304800 | 17884748 ~ 17885393 (-) |
| G203700 | NA | non-coding | downstream | 305628 | 17884317 ~ 17884565 (-) |
| G203851 | NA | non-coding | upstream | 80894 | 18272216 ~ 18272423 (-) |
| G203868 | NA | non-coding | upstream | 417161 | 18608483 ~ 18608699 (-) |
| G203869 | NA | non-coding | upstream | 417436 | 18608758 ~ 18609089 (-) |
| G203874 | NA | non-coding | upstream | 472948 | 18664270 ~ 18664576 (-) |
| G203944 | NA | non-coding | upstream | 558696 | 18750018 ~ 18750379 (-) |
| G203836 | NA | other | downstream | 5619 | 18182055 ~ 18184574 (-) |
| LOC120549177 | nt5e | other | downstream | 59785 | 18123139 ~ 18130408 (-) |
| znf292a | znf292,LOC103355984,LOC100696383 | other | downstream | 106419 | 18071484 ~ 18083774 (-) |
| ppp2r5ca | ppp2r5c,LOC106937856,LOC102790868 | other | downstream | 483814 | 17681603 ~ 17706379 (-) |
| LOC120548841 | begain | other | downstream | 513889 | 17527527 ~ 17676304 (-) |
| itgb1bp1 | itgb1bp1 | other | upstream | 937433 | 19128755 ~ 19132853 (-) |
| ppm1aa | ppm1a | other | upstream | 1609953 | 19801275 ~ 19830929 (-) |
| itpk1b | itpk1,LOC102785853 | other | upstream | 1850658 | 20041980 ~ 20090103 (-) |
| zdhhc22 | zdhhc22 | other | upstream | 2603544 | 20794866 ~ 20797775 (-) |
| G204685 | coq6 | other | upstream | 2660774 | 20852096 ~ 20853084 (-) |
