G35576


Basic Information

Item Value
gene id G35576
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 2909197 ~ 2983784 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU47606
tctcctctagctgtagataggtggggtctcctctagctgtagataggtgaggtctcctctagctgtagataggtgaggtctcctctagctggagataggtggggtctcctctagctgtagataggtggggtctcctctagctggagataggtgaggtctcctctagctgtagataggtgaggtctcctctagctgtagataggtggggtctcctctagctgtagataggtggggtctcctctagctgtagataggtgagggtctcctctagctggagataggtggggtctcctctagctggagataggtggggtctcctctagctggagataggtggggtctcctctagctgtagataggtggggtctcctctagctgtagataggtgaggtctcctctagctgtagataggtgaggtctcctctagctggagataggtggggtctcctctagctgtagataggtggggtctcctctagctgtagataggtggggtctcctttagctgtagataggtggggtctcctctagctgtctCCTCTAGCTGGAGATAGGTGGGGTTTCCCCTAGCtggagata
>TU47608
tctagctgtagataggtggggtctcctctagctgtagataggtgggttctcctctagctgtagataggtggggtctcccctagctgtagataggtgaggtctcctctagctggagataggtggggtctcctctagctgtagataggtggggtctcctctagctggagataggtgaggtctcctctagctgtagataggtggggtctcctctagctgtagataggtggggtctcctctagctggagataggtggggtctcctctagctggagataggtggggtctcctctagctgtagataggtggggtctcctctagctgtagataggtgaggtctcctctagctgtagataggtgaggtctcctctagctggagataggtggggtctcctctagctgtagataggtggggtctcctctagctgtagataggtggggtctcctttagctgtagataggtggggtctcctctagctgtctCCTCTAGCTGGAGATAGGTGGGGTTTCCCCTAGCtggagata
>TU47609
GTCGCTTTAAAGGGATaagccaccgtttgttgaaatagggctcatcacggtctcccctagctgtagataggtggggtctcctctagctgtagataggtggggtctcctctagctgtagataggtgaggtctcctctagctgtagataggtggggtctcctctagctggagataggtggggtctcctctagctgtagataggtgaggtctcctctagctggagataggtggggtctcctctagctgtagataggtggggtctcctctagctgtagataggtggggtctcctttagctgtagataggtggggtctcctctagctgtctCCTCTAGCTGGAGATAGGTGGGGTTTCCCCTAGCtggagata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47606 True 579 lncRNA 0.54 4 2909532 2983784
TU47608 False 521 lncRNA 0.54 3 2909197 2983784
TU47609 False 368 lncRNA 0.53 3 2983260 2983784

Neighbor

gene id symbol gene type direction distance location
ccdc51 NA coding upstream 26434 2863536 ~ 2882763 (+)
LOC120557395 NA coding upstream 73069 2826889 ~ 2836128 (+)
LOC120557397 NA coding upstream 90407 2810258 ~ 2818790 (+)
LOC120558018 NA coding upstream 163917 2735859 ~ 2745280 (+)
LOC120558182 flnb coding upstream 174663 2640388 ~ 2734534 (+)
trnae-cuc_2 NA coding downstream 299147 3282931 ~ 3283002 (+)
trnae-cuc_3 NA coding downstream 302046 3285830 ~ 3285901 (+)
c4h1orf50 LOC103374819,LOC106909683,LOC106955718 coding downstream 775710 3759494 ~ 3766040 (+)
nuf2 nuf2 coding downstream 823388 3807172 ~ 3830945 (+)
cfap92 NA coding downstream 910521 3894305 ~ 3913220 (+)
G35572 NA non-coding upstream 25077 2867927 ~ 2884120 (+)
G35548 NA non-coding upstream 122858 2783952 ~ 2786339 (+)
G35544 NA non-coding upstream 134607 2766807 ~ 2774590 (+)
G35541 NA non-coding upstream 149701 2759204 ~ 2759496 (+)
G35380 NA non-coding upstream 188496 2720074 ~ 2720701 (+)
G35584 NA non-coding downstream 17219 3001003 ~ 3067663 (+)
G35587 NA non-coding downstream 30247 3014031 ~ 3053586 (+)
G35589 NA non-coding downstream 36692 3020476 ~ 3078404 (+)
G35585 NA non-coding downstream 239955 3223739 ~ 3224162 (+)
G35627 NA non-coding downstream 289363 3273147 ~ 3273546 (+)
G35534 NA other upstream 161425 2747220 ~ 2747772 (+)
G35364 NA other upstream 321035 2583514 ~ 2588162 (+)
G35359 NA other upstream 414606 2487994 ~ 2494591 (+)
LOC120556786 NA other upstream 521223 2385615 ~ 2387974 (+)
asip1 NA other upstream 857054 2024224 ~ 2052143 (+)
G35618 NA other downstream 260447 3244231 ~ 3358820 (+)
epha8 epha8,LOC102791453 other downstream 469816 3453600 ~ 3589612 (+)
G35791 LOC101072424,LOC104921976 other downstream 965050 3948834 ~ 3950128 (+)
G35921 NA other downstream 1503751 4487535 ~ 4585475 (+)
LOC120557928 NA other downstream 1546049 4529833 ~ 4532862 (+)

Expression


Co-expression Network