G41194 (ipo9)


Basic Information

Item Value
gene id G41194
gene name ipo9
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 23247187 ~ 23247895 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU55433
AGCGCAGAGTCCAGTGGGGATCTTGTCGGAGGGAGCCTGCATGATGCTGACCAGCGTGGGAATGAGACGCATCTGCATGGGGCCCTGGCAGCCTTCGATCTGTGCCAGTTCCTTGAAGATGTCCTGAGCCAGGGACGCCACCACAGGGTCTGAGGAGAAAAGAGGGGATTGGGCATTGTTATATTTAAGGAAAATAGCAATGGTGAGGGGGCAGATCTTGTTCTCTGCGCTGGTGGTGAAGGCCGGGTCGACAGTGCAGACAATGCACAGAGTCTCCATGACGAGGGTGAGCACCTCGGAGCTGAACTGGGCGGCAAGTTGGACCAGTCCCTCGAGGATGCTGGGGAGGAAGGGCTGAAGGACGTGTGTGCTCTCCGACAGCTTCAGCTGATCACAA

Function

symbol description
ipo9 Predicted to be involved in protein import into nucleus. Predicted to act upstream of or within intracellular protein transport. Predicted to be active in cytosol and nuclear envelope. Is expressed in several structures, including blood; immature eye; nervous system; ventral mesenchyme; and ventral mesoderm. Orthologous to human IPO9 (importin 9).

NR:

description
PREDICTED: importin-9

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU55433 True 397 lncRNA 0.57 2 23247187 23247895

Neighbor

gene id symbol gene type direction distance location
LOC120557221 NA coding downstream 16448 23217382 ~ 23230739 (-)
tubb1 LOC100698256,LOC104933617,LOC101468168,LOC102788202,LOC106903421,LOC102237703,LOC103135551,LOC107385350,LOC106515122 coding downstream 70608 23173339 ~ 23176579 (-)
prelid3b LOC104933616,LOC103355892,LOC107385352 coding downstream 75304 23163504 ~ 23171883 (-)
aurka aurka coding downstream 85564 23155010 ~ 23161623 (-)
ppp1r16b ppp1r16b coding downstream 161437 23002107 ~ 23085750 (-)
inka2 fam212b coding upstream 96964 23344859 ~ 23359366 (-)
LOC120557287 LOC103355884,LOC103135478,LOC106955534 coding upstream 123040 23370935 ~ 23510879 (-)
st7l LOC103355879,LOC104945807,LOC106517636 coding upstream 264541 23512436 ~ 23535278 (-)
snta1 snta1 coding upstream 439233 23687128 ~ 23724649 (-)
necab3 necab3,LOC103362929 coding upstream 531587 23779482 ~ 23824411 (-)
G41086 NA non-coding downstream 372728 22874129 ~ 22874459 (-)
G41002 dctn2 non-coding downstream 775948 22464273 ~ 22471239 (-)
G40978 NA non-coding downstream 855255 22307134 ~ 22391932 (-)
G40971 NA non-coding downstream 965777 22281037 ~ 22281410 (-)
G40953 NA non-coding downstream 1093599 22144690 ~ 22153588 (-)
G41197 NA non-coding upstream 2041 23249936 ~ 23252555 (-)
G41212 LOC106531700,LOC106566052,LOC102779441,LOC107745329 non-coding upstream 41712 23289607 ~ 23293075 (-)
G41228 NA non-coding upstream 115153 23363048 ~ 23363826 (-)
G41276 tox2,LOC106920125,LOC107103089 non-coding upstream 385883 23633778 ~ 23653980 (-)
LOC120558071 LOC107712283,LOC107663761,LOC107746645,LOC107662224 non-coding upstream 808286 24056181 ~ 24057065 (-)
G41167 slc32a1,LOC103135573,LOC102216414,LOC106515126 other downstream 93451 23151085 ~ 23153736 (-)
LOC120556776 LOC102209485,LOC104950336 other downstream 281224 22931491 ~ 22965963 (-)
rpl29 NA other downstream 1471769 21771585 ~ 21775418 (-)
iars1 iars other downstream 1476649 21715865 ~ 21770538 (-)
slc6a11b slc6a11 other downstream 1696678 21520669 ~ 21550509 (-)
LOC120556806 NA other upstream 1638175 24886070 ~ 24888226 (-)
manbal manbal other upstream 1774541 25022436 ~ 25025061 (-)
ncoa5 NA other upstream 2062850 25310745 ~ 25357934 (-)
tspan2a tspan2 other upstream 2476073 25723968 ~ 25740106 (-)
LOC120557963 grm4,LOC108231655,LOC100700221,LOC102289456,LOC104955002 other upstream 3076851 26324746 ~ 26483541 (-)

Expression


Co-expression Network