G41228


Basic Information

Item Value
gene id G41228
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 23363048 ~ 23363826 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU55479
ATAGATACTTGTTCTACTAAACTAGTTCCATTATGAAGCTGCTCCATATAAAGTTGGGCTGGTTGGATGGTTGGTTTAGAGCGTAGTCTATGGTTTAGAGCGTAGTCTATGGTTTAGAGCGTAGTCTATGTCCCTGCCGTGACTGCTCtgttgccgccagaaattccgctCTCTTGCGGcgggatgtccgttaccttctgctttctttgtgttggaattttaaacgtCGATTTATGAGGGgaatggttaactgctcctcagatctctgcagggtaaatcaagacagctagctagactatctgtccaatctgagttttcagtTGCAcaattaaaacaacttttgaacgtacacatgttccaccaaaacaagttccttcccgaggctattttgcagcagcaccgtggctctgccgagtgcttagcgctgcccatgacgattgtgattggtttaaagaaatgccaataaaccagagcacgtttttctcccatcccagaatgctgtgtggactagccagaccctcctccgcagcgctgtggatgaagggctggcaaagcgagactatttaGAGCCCAGCACTGGGCAAAAACTCCAGCCTGAGCCCGGCCCTGGAACatgagatagaaaaaaaaaaataaaataagaacatGAGATAGacctccttccttctctttctctcttagcCTCCGTCAATTCATCTGGGAAGCATCACCAACATCAGGCCCTGATAATGGGCACCAAGTTTCCTCAGAAGGTCTTCGCTGGACAGGGAGGAGGAACt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU55479 True 779 lncRNA 0.47 1 23363048 23363826

Neighbor

gene id symbol gene type direction distance location
inka2 fam212b coding downstream 3682 23344859 ~ 23359366 (-)
LOC120557221 NA coding downstream 132309 23217382 ~ 23230739 (-)
tubb1 LOC100698256,LOC104933617,LOC101468168,LOC102788202,LOC106903421,LOC102237703,LOC103135551,LOC107385350,LOC106515122 coding downstream 186469 23173339 ~ 23176579 (-)
prelid3b LOC104933616,LOC103355892,LOC107385352 coding downstream 191165 23163504 ~ 23171883 (-)
aurka aurka coding downstream 201425 23155010 ~ 23161623 (-)
LOC120557287 LOC103355884,LOC103135478,LOC106955534 coding upstream 7109 23370935 ~ 23510879 (-)
st7l LOC103355879,LOC104945807,LOC106517636 coding upstream 148610 23512436 ~ 23535278 (-)
snta1 snta1 coding upstream 323302 23687128 ~ 23724649 (-)
necab3 necab3,LOC103362929 coding upstream 415656 23779482 ~ 23824411 (-)
tbc1d20 tbc1d20 coding upstream 473839 23837665 ~ 23847899 (-)
G41212 LOC106531700,LOC106566052,LOC102779441,LOC107745329 non-coding downstream 69973 23289607 ~ 23293075 (-)
G41197 NA non-coding downstream 110493 23249936 ~ 23252555 (-)
G41194 ipo9 non-coding downstream 115153 23247187 ~ 23247895 (-)
G41086 NA non-coding downstream 488589 22874129 ~ 22874459 (-)
G41002 dctn2 non-coding downstream 891809 22464273 ~ 22471239 (-)
G41276 tox2,LOC106920125,LOC107103089 non-coding upstream 269952 23633778 ~ 23653980 (-)
LOC120558071 LOC107712283,LOC107663761,LOC107746645,LOC107662224 non-coding upstream 692355 24056181 ~ 24057065 (-)
G41352 NA non-coding upstream 974085 24337911 ~ 24338356 (-)
G41397 rdh5,LOC100710882,LOC102797111 non-coding upstream 1199519 24563345 ~ 24563682 (-)
G41398 rdh5,LOC104964277 non-coding upstream 1199937 24563763 ~ 24565758 (-)
G41167 slc32a1,LOC103135573,LOC102216414,LOC106515126 other downstream 209312 23151085 ~ 23153736 (-)
LOC120556776 LOC102209485,LOC104950336 other downstream 397085 22931491 ~ 22965963 (-)
rpl29 NA other downstream 1587630 21771585 ~ 21775418 (-)
iars1 iars other downstream 1592510 21715865 ~ 21770538 (-)
slc6a11b slc6a11 other downstream 1812539 21520669 ~ 21550509 (-)
LOC120556806 NA other upstream 1522244 24886070 ~ 24888226 (-)
manbal manbal other upstream 1658610 25022436 ~ 25025061 (-)
ncoa5 NA other upstream 1946919 25310745 ~ 25357934 (-)
tspan2a tspan2 other upstream 2360142 25723968 ~ 25740106 (-)
LOC120557963 grm4,LOC108231655,LOC100700221,LOC102289456,LOC104955002 other upstream 2960920 26324746 ~ 26483541 (-)

Expression


Co-expression Network