G41893


Basic Information

Item Value
gene id G41893
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 26517923 ~ 26540946 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU56369
GTGTTTATTTGTTGGCACATTTATATTACAATCTTCAGTCTTCTTGCACTGGTTTAATTCCAGTCCCAAatgacagagaggaaaagaaaaattcCAGTGACACGTATACCTTGGAGAACACAATTGCAAGTTATGTAACTTCAAGGCTGAGGTCGGGTGCACATGTTCAGTTCATTTAATTACTAGTATTTGGGGTAATCTTTTAGCAGCTTTTTCAATCCATTTCTAATTAGTGAAGTCATTTAGTCATGAAAATGATGTCATCGTGCTAAAGGAAACTGTTACAATCCTCAGCTGCAAAGTGATgtgcttttcatttttcattgttgCTTTGGCCACAagatgaggcaatacatatttAAACCACCACTTTTGGTAAAttaaaagaagtgacttcatcTGAAGCTCTAATTGTTCTATCATTAATTcatcccccccccttcccccaagTTCAAAAGAGCCAATTGTGAAGAAAGGTCCGACGCCTTTTGCCTCCAACGTGCTTATATGGATACATGTACTTCATAAATTCCCTCCTGAACTTCAGCCAAAATCACTTTACTTATAACAGGAAGTGCCTGAATTTTAAGTTAGCAGGGAGtggtttataataataaaaaaagactacTCCTTATTGACCAACGCCAGTGTGTCCTCTGGCTGTAAGGGTGCTGTGTTAGCTATATACAAGACATTAGCTTGTCAATAACACAACagattaaagaaaagaaaaaaatagatcaAGAACAAGTGGTCATTAATTAAATCACTGGCTGTTACTTGTAGAAATCCTCCtcacattcattttgacagtACCTGTCACCGGCATCCAACCACCAAGAGCAAATTGCCAATCACTTAAGAAaggttttagatttttttcttccaaaccatataaaaaaaaaaaaaaaaaggttcatcCCCTTAACATCCGATTGCACATTTCCTTACAGACTTAAAGGTCTAATCAGCACAAACGCTCATATGAAGTGCCAGGTAGAGCATCATAAAGCAAGACTTTGGCCACCTCACCTTTCTGATACACAGCAACAGAACAGTTCAAAGGCTCAAACTGTTGGGAAGGAGCCTTAGACTCCTTTCACATATACTGTCAATCAGAACTAGTAGTTCAACTTCTTGAAATATTAGGacttattttatgtttttaaatattcttGTAATATACCAACTTAGGCTTTTGAAATAATTggactttttctttttggagggggggggtctaatttgtgtcaatTTAGGGGTCCTTCAcatgaaaaagtttgggaaccgcTGTCCCATGAAGCCCCCCCCCGTTTCTGGTCGACTGAATCACGATACTTGAGTTTTCTGTCCCTATTCAAAGTTAAATGAACATCTGCTACTGTCCTGGACAGTAAATTTTGAGCATCCCATCATTTTAACCAAAGATTAAAACAATTTTGCTTATTTTGTTGCCATTCAAAAACTACAGCTCCCATGAGTCTTAGCCATAGGCGCAAGATCAAAACCCAATTAGAGCTGTAGTTTGAATGCTGGAAAGGTAATCATTGACTTATatgtactaaaaaaaaaaaaaattaaaagacatAACGTCTGCCAATTTTGCTCCATAtagcatacagtatatgctgtatgTGTAAATATGTCAACTTTTTGCCAACAAGTTTGCcatataatgttaaaaaaaaaacaatgtcaatgttgtgtttacagcttgttttcCACAGCTCCCAAGTGGTCAAAAACTCTTATTACAGGTTTAAATATGGACAGAAAACGACAATCATGTTTCCCTTTTTTAGAAAGACCAATCAAAGAAAGCCTATGAGAAAACACACCGACAGTGAACAGCTGCTGGCTTGAAAAGAAATTTCAGGTCTGCTTTACTTTTTAACTAAGTAGTGGTTTGGAAACTCAAGACTTTAGCTTGGCCAAAAAACAACAGTATCACTTAAGGTTACAAATTTGTTTTGGTCTAAGTGAAAAGGAAGGATTTGAGAATATTCTATTGTAGACTTTTCACTCTCACCAACAACCACGGCCACATGCCTCGTTCTTTAGCCTCAGATGTACTGTATGCTATCTCAAGAGAAAGTTCCCAACAGCTCCAAAGCCAACGCCAATCACTTCTTCCAGCCTCAGTTGAAATGACATGTCGGACACGACATCACAGATGTGCAAGAGGTGTTTTGTCATTTGTACTCACACCTTTGATCTATacagaaataaacaatttacaataaaaaccTCTAACGTGCTATCTACAGAGCCTCCAGTTTCACAGTATTGAGCCAGCTGCCCCTGCCACATCGAGGCCAAGTGACGCAGCTCGGCTAAAGAGACTTTTGCCAGACGTTTgagagaaaaacataaaaacaataactaGTATCCAAAAGCATTTTACATGTTAAAAAACGAGGTCTCAAACTGTACAAGGTTTGTTTGTTCTGCATCAGCGTTATAGATTCCATTACTTTCGATGTCAAGCAGGTGTTTTGAGTGTTTTTGGGATGCCGATTAAATACTATACTTAAAAAGAAtggggtaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacttttta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56369 True 2581 lncRNA 0.37 2 26517923 26540946

Neighbor

gene id symbol gene type direction distance location
igfn1.1 LOC103355755,LOC102196619,LOC104967663 coding downstream 227927 26261888 ~ 26289996 (-)
LOC120557407 LOC103356232,LOC103386529,LOC104967664,LOC108231589 coding downstream 257133 26249121 ~ 26260790 (-)
igfn1.4 NA coding downstream 277400 26217444 ~ 26240523 (-)
LOC120556798 LOC103355783,LOC102777137,LOC100707387,LOC102291499,LOC102197560,LOC101482885,LOC108231471 coding downstream 314934 26191493 ~ 26202989 (-)
LOC120556797 LOC103355791 coding downstream 338331 26173967 ~ 26179592 (-)
rps10 rps10,LOC107595410 coding upstream 1743 26542689 ~ 26548775 (-)
LOC120556869 spdef,LOC103355713 coding upstream 48053 26588999 ~ 26601435 (-)
ilrun LOC104928314,LOC103355702,LOC102220159,LOC106918242 coding upstream 75370 26616316 ~ 26627302 (-)
LOC120557731 tcp11 coding upstream 160481 26701427 ~ 26711118 (-)
phc2b LOC103355651 coding upstream 173438 26714384 ~ 26745049 (-)
LOC120557652 NA non-coding downstream 344283 26169460 ~ 26173640 (-)
G41744 NA non-coding downstream 520416 25995974 ~ 25997507 (-)
G41725 NA non-coding downstream 580892 25936757 ~ 25937031 (-)
G41721 tulp1 non-coding downstream 584877 25932287 ~ 25933046 (-)
G41720 tulp1,LOC100697980,LOC102297059,LOC101066604,LOC102776833 non-coding downstream 586013 25923243 ~ 25931910 (-)
G41902 NA non-coding upstream 44874 26585820 ~ 26586237 (-)
G41906 NA non-coding upstream 88870 26629816 ~ 26633651 (-)
G41956 NA non-coding upstream 390829 26931775 ~ 26932007 (-)
G41957 NA non-coding upstream 404014 26944960 ~ 26945248 (-)
G41958 NA non-coding upstream 405703 26946649 ~ 26947139 (-)
LOC120557963 grm4,LOC108231655,LOC100700221,LOC102289456,LOC104955002 other downstream 34382 26324746 ~ 26483541 (-)
tspan2a tspan2 other downstream 777817 25723968 ~ 25740106 (-)
ncoa5 NA other downstream 1159989 25310745 ~ 25357934 (-)
manbal manbal other downstream 1492862 25022436 ~ 25025061 (-)
LOC120556806 NA other downstream 1629697 24886070 ~ 24888226 (-)
G41944 NA other upstream 237353 26778299 ~ 26894030 (-)
LOC120557442 hes5,LOC104956007 other upstream 2200852 28741798 ~ 28750233 (-)
LOC120556842 rpp14,LOC102775666,LOC101465350,LOC103374991 other upstream 3495436 30036382 ~ 30037321 (-)
romo1 romo1,LOC102788570 other upstream 3584805 30125751 ~ 30130317 (-)
LOC120558045 NA other upstream 4098025 30638971 ~ 30679082 (-)

Expression


Co-expression Network