G42674


Basic Information

Item Value
gene id G42674
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 30002673 ~ 30005924 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU57376
GGGCGTTTTAAATCTTCCTCCGTTCTAAGTCCACCACAAGCATTTGCAATTTACATGACTTACTCTCGATTGTCCTGaacgtttgttttttattaaatgtttattcAGTTTATACAGGTATCATTTCATCACAGCAGTCTTGctagatttttttaaaaaatttgaatacAAATGATGAGGAGGGTCATTTTGGAgcttaatatatatttaatatttgaagGTGGCATTGGGATAAAACTGTAGGTGACCTGGAGATCGAAGAGTGCTTTTTTTAATGCCAATTTACTTGTAATGCAGCGCGTCTCTGGGACTCtgaattgaattgttttttttacaaacagaCCTCTCGTCTTCCACCCCTCGTGGGTAAAGTGCTGCAGAGACACATACTCATACGATTTAATGACCATTCAAGATGTGAAGACCATCGCATTGGACCGGATTGCActgaagaataaaaataaaagatttcagCACAGAGCATTGCTTTAAAACAAACGCTCCGAGTGCTGCATCCTGGATTGTAGTGATCAGAGTCATCAGGCGGCAGGAGTCACCTGAGCTCAACATTCACAAGAGCAGCTCTGTCCAAATCACAGGCTAACACTTTAGCACACAGTATGCCAGCTAATCCTGGGTGAGAGAGATTCAAGAAATGAGAACTGGGACACAAGTGTGGCATCCTGTGGGAAGATCCTTCTGTCAATCCGAATACAGTTTAGTGCCGTTTCTGTAAAGGTTAACAAGTAACCGGCGGCCTCGTGGTGCTGAGTCACACGCACTGTTGAAGGaataattcaacattttggggaatACGCCTATTGGCTTTCGTgcggagagttagatgagaagacggataccactctcatatcggTCTGTTAAATATAAAACTACAGTCTGaagcctgttagcttagcacaaaggcTGAAAACAATGGGGGAGCCTGCCTCCGTCTAACAGTAATAAAGTCTGCCTATGAACACTGGCTCCTAATCACTAGTTAACATGTTGTATATTGCTTGTTTAATCGGTGTACAAAGATGAGTGAGTTTAAAgatgctggtaggcagattgtGTTATCTTCAGACTGAGGCAGGCTAGCattgctaggctaagctaagtggctgctggctgtaactTCATACTTAACAGACATACATATGATTAATATGGATCTTCTCAAAGCAAATAAGTGCAATTGCCAAAATGTCTAACTATTCTTTTCAGCAATCAGATCAAATACGTCTCATAATGAAAAATGGTGGACTTTTAACTGCAGATTCACTGCGACGCTGCATTCAGTACATGTTTAAGGTTGAAAGTAAGAAGTTGACAAAACAAAACTCACAAAAAAAGGTCCATTTAGTCACTGTTCCAGAGCTTTCTATTGCATATCATCACACCatcttcctcagcagatggagttgCCCAGTTGTCATATTTCCACCATGGTCCAtagcctggttaacaccagacccttctcagttgtagctgagagtgggtctgggcaaggttcattcacagcccatttccaaaggggcgtcaccaacggacaccaatcagaccaacgatccgggtgacgtagcagtgacagcagcatcaacgggttgctgcgcttcggtggccgccatgttgaatgtaaacaaaaagctgcttgccatCGCTGcactatcgtcatcgtgtaaagcccgccagTTGCAGTTGGTGTCTCGaattggaaaaattggaaacgGGCTTGAATGGGCTGTTGGCCAGACCGACTTGCAGAGCAAaactcaaatttgccggaagttggtcagggttttcccaggctaggaAGTCCATAGAGTTCAGAAAAATGGAGCCAAATCGTCAAGCTACTGATGTGATACGATCAAAAGCTCCAGAACGGCTACTATATAGACCCTATAGTGGTTAAACAATACAGATTCAGAGAAAAGCTCTCCTTTAAAACAGACTGACGGATCTGAATCACCCATTTTCTTTCCCCAAATCCAAGAATTTGACATTTACTCccactttgactttttaagaGTTCTATTCCACTCCGTTTTATATATTACTATAATTATTGTTGTAAACTAAATGTCTCTGGATTTGTTGGTCGGAGGAAACAAGACGTGAAGATGTGACCTTGGCTTCTCGACAACTGTGACAGACATTTTTCACTAcgttttgacattttaatagTCAAAACGGTAATAAAAAGAATCATTACTTGCTTATTTAGGGACATTTTCCCCCATATGCCGATAACCACAGAATAGCATCTTGTGTGCAAAAGTGTTACTATCCTCAGGCAGAGCATTATACATACAAATGATCTGGTATGTATGGTATTGTCACATACaatattttaacaaaaacagaaaaaaacattcatatttCTGTAGGCACAAGAATCCACATggcacaataaaataaaaataatctcaGCTCGGTgacaacattaaaatacaaacaggatttaaaaagaaaagaaaaaaattaattaaatcaaatgcaaaacacttaaaaataaCAGCAATCAACACAATAAGGGTCTGAAATTAACCCTGGACGGGCATCAGATGAAGGTGAACAGCTCTGTGGAGGGTAACGATGTTAAAGTCACCAGTGCTGTTTAACAAGCTAAGTAGAGAAGGGCAAAGAACGGGGGGTGAAACTGCATCTTTATTTTATCATGTGCTTGCAGTCCCTCCTTTTTTCTTATCTGAAGATATCTTTTGCTTTCAAAAATACTCAAGGTTAGCATCGATGTGTTTTCATCAATACACCTTCCCATGAATTATGATAAACACTAGATTTTTCAAGGCTTCAACCCAGTTACACTACAGCCCTCATCAGATTTTCACACTTCTTATTCTGAAGAGAAGACTATAAAAGCTTGCAGACCGACTGAATCAGCTGCTGAAATGCGTTGCACTCGTTAACTACGGATTTAAAAGCTCAAATCCAAAAAGACACAGAATGAGCAAAGCGGGGATGCTGTGAAAACTAAGTTTGAAGTTGGTCATGTGTTGCATTATGAAAAGTTTCTGGCCTCTAATCTCTGATGTTCAGTACATTCAATTACAAGTACGGGGACTGTTCAACACACTACCTGCAAGCAACTGGAAAATTACCACACAACTTCAAAAAGTAATACCAAAGGTGACTAAATGTTGAACTCCCTGTAGCAAAGTTTCAAGTCTCTGCAAGTTGATTTTCAGAGAAATGACTGAAACAAATGGCTGTCTGAAAGGaactaaa

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU57376 True 3252 lncRNA 0.40 1 30002673 30005924

Neighbor

gene id symbol gene type direction distance location
LOC120557186 NA coding upstream 26682 29972493 ~ 29975991 (+)
stab1 NA coding upstream 165207 29725512 ~ 29837466 (+)
nisch NA coding upstream 285333 29670469 ~ 29717340 (+)
hgh1 hgh1 coding upstream 345488 29639606 ~ 29657185 (+)
zgc:153675 LOC104941726,LOC100706129,LOC106954467,LOC103130791,LOC107080719,LOC105920322,LOC101469258,LOC103464637 coding upstream 366033 29630099 ~ 29636640 (+)
LOC120557789 NA coding downstream 80499 30086423 ~ 30088843 (+)
LOC120558110 LOC103358872,LOC102788290,LOC106565051,LOC100694607 coding downstream 86243 30092167 ~ 30098233 (+)
hesx1 NA coding downstream 96978 30102902 ~ 30106485 (+)
mych LOC103358868 coding downstream 188715 30194639 ~ 30198902 (+)
LOC120557912 NA coding downstream 349042 30354966 ~ 30377896 (+)
G42672 NA non-coding upstream 7895 29991923 ~ 29994778 (+)
G42655 pdhb non-coding upstream 17685 29918763 ~ 29984988 (+)
G42536 NA non-coding upstream 341247 29661206 ~ 29661426 (+)
LOC120557726 NA non-coding upstream 536011 29464818 ~ 29466662 (+)
G42453 LOC104927822 non-coding upstream 710928 29256755 ~ 29291745 (+)
G42675 NA non-coding downstream 3113 30009037 ~ 30010008 (+)
G42700 rpp14,LOC102775666,LOC103374991,LOC104948461 non-coding downstream 31073 30036997 ~ 30040399 (+)
G42727 NA non-coding downstream 130062 30135986 ~ 30137009 (+)
G42728 NA non-coding downstream 136458 30142382 ~ 30143273 (+)
G42726 NA non-coding downstream 137454 30143378 ~ 30144325 (+)
G42449 NA other upstream 760420 29240413 ~ 29242253 (+)
ephb2b LOC104917933,LOC103376520 other upstream 2179413 27670963 ~ 27823260 (+)
anks1ab tcp11,LOC103355682,LOC103134623,LOC101477444,LOC102192099,LOC103464730,LOC107089148,LOC106918244 other upstream 3237936 26652851 ~ 26764737 (+)
G41850 rps10,LOC102793608 other upstream 3453874 26542507 ~ 26548799 (+)
G41825 NA other upstream 3729358 26268602 ~ 26273315 (+)
ergic3 ergic3,LOC102788871 other downstream 103611 30109535 ~ 30135834 (+)
G43045 NA other downstream 2454208 32460132 ~ 32460863 (+)
G43051 LOC102201960 other downstream 2464871 32470795 ~ 32471605 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other downstream 3032010 33037934 ~ 33041311 (+)
G43277 NA other downstream 3181814 33187738 ~ 33212318 (+)

Expression


Co-expression Network