G42727


Basic Information

Item Value
gene id G42727
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 30135986 ~ 30137009 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU57449
AGGAACTTGTGGTCCTTTTTGaattttgctctctctctcattaaATTAAATGCCAACAGGACAGAGTCAGAATCAGACATCGACGGGCGACGTTTTTTGTGATTGAACTCGAGCAGAAAGGAGGAGGCCTCCTCTGCCTCCAGATGCTTCTTCCTGGAAAAAGGGGGACTTCCTTCCCTCGCTCCTGTTAGTTAACGTCCTGCTTCAGCGCCGCTCAGCTCGCTACATTGGATGTTCGTGAGACGATCTGTGGTCGATCCTCTGTTCCAGAGGGGTGAGGGTGAGAGGGCACAGAGactttttaaaggaatacgtcacccaacattttcacttttcttATCAGTTTCTCATCCCTTGCAACCTGGACTGCTTGAGGAAACAATGTTTGTACTCACATTTCTTTTAACAGAATCAAAGACAGACATACATGCTTTCTCATGAGTACAAGAAAGTTATTGTGTGATCTCAATGTAATACATTTATTGAGATCAGAAAATTCTTGTTTTGGTCCTAGGATTGAAGGATAAATCTGGTGATATTTTGTccacaaatcccatgaaaagaccaaatcCAACTATGAACTGTTACCAATaacaagtattgtgtgtgtacgCAAAGCCTAAtatatcttcttcctctgtgccatagagcttaATTGTTGTCCAaacactattaaaaacacatcagtgagcaacactgttgcactgggtgacatgtttctTCATCACCATGAACACGCTCAGTGTAGTCTATTTTGtctcaatcccacatacaccgtcctgctgccacaTGTACCCACTAGAGCACCGAATGTGTATTAGTCcgctgctgaaaatagtccccaacaaatgcactatttattCCTGTTTAATCTTTGCTAAAAGCTACAGTGACCAGCTGTTTTGGggaagctgttttttttaagatcagtcttcagtaggaaccaatgggcttgggtctgagagccacagacaggtTAGGGATATCCAAAAGCAATGAGAGACAGATGGTTTTGgacttttca

Function

NR:

description
PREDICTED: A-kinase anchor protein 9-like

GO: NA

KEGG:

id description
ko00510 N-Glycan biosynthesis
ko03060 Protein export

RNA

RNA id representative length rna type GC content exon number start site end site
TU57449 True 1024 lncRNA 0.42 1 30135986 30137009

Neighbor

gene id symbol gene type direction distance location
hesx1 NA coding upstream 29501 30102902 ~ 30106485 (+)
LOC120558110 LOC103358872,LOC102788290,LOC106565051,LOC100694607 coding upstream 37753 30092167 ~ 30098233 (+)
LOC120557789 NA coding upstream 47143 30086423 ~ 30088843 (+)
LOC120557186 NA coding upstream 159995 29972493 ~ 29975991 (+)
stab1 NA coding upstream 298520 29725512 ~ 29837466 (+)
mych LOC103358868 coding downstream 57630 30194639 ~ 30198902 (+)
LOC120557912 NA coding downstream 217957 30354966 ~ 30377896 (+)
LOC120557913 NA coding downstream 252001 30389010 ~ 30407845 (+)
tomm34 tomm34,LOC102784590 coding downstream 291998 30429007 ~ 30442999 (+)
abraa LOC103364886,LOC100691009,LOC101485260 coding downstream 367685 30504694 ~ 30513488 (+)
G42700 rpp14,LOC102775666,LOC103374991,LOC104948461 non-coding upstream 95587 30036997 ~ 30040399 (+)
G42675 NA non-coding upstream 125978 30009037 ~ 30010008 (+)
G42674 NA non-coding upstream 130062 30002673 ~ 30005924 (+)
G42672 NA non-coding upstream 141208 29991923 ~ 29994778 (+)
G42655 pdhb non-coding upstream 150998 29918763 ~ 29984988 (+)
G42728 NA non-coding downstream 5373 30142382 ~ 30143273 (+)
G42726 NA non-coding downstream 6369 30143378 ~ 30144325 (+)
G42725 NA non-coding downstream 7448 30144457 ~ 30145125 (+)
G42752 NA non-coding downstream 174586 30311595 ~ 30312042 (+)
G42755 NA non-coding downstream 181170 30318179 ~ 30332735 (+)
ergic3 ergic3,LOC102788871 other upstream 152 30109535 ~ 30135834 (+)
G42449 NA other upstream 893733 29240413 ~ 29242253 (+)
ephb2b LOC104917933,LOC103376520 other upstream 2312726 27670963 ~ 27823260 (+)
anks1ab tcp11,LOC103355682,LOC103134623,LOC101477444,LOC102192099,LOC103464730,LOC107089148,LOC106918244 other upstream 3371249 26652851 ~ 26764737 (+)
G41850 rps10,LOC102793608 other upstream 3587187 26542507 ~ 26548799 (+)
G43045 NA other downstream 2323123 32460132 ~ 32460863 (+)
G43051 LOC102201960 other downstream 2333786 32470795 ~ 32471605 (+)
LOC120556790 LOC104958239,LOC105940397,LOC103464819,LOC103150142,LOC106923340 other downstream 2900925 33037934 ~ 33041311 (+)
G43277 NA other downstream 3050729 33187738 ~ 33212318 (+)
angpt4 LOC103371190,LOC107384963,LOC105920078,LOC106931961 other downstream 3125186 33262195 ~ 33336767 (+)

Expression


Co-expression Network