ccdc120b (ccdc120,LOC103365908,LOC102209343,LOC101464396)


Basic Information

Item Value
gene id ccdc120b
gene name ccdc120,LOC103365908,LOC102209343,LOC101464396
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 7129351 ~ 7143644 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039797113.1
CAGGATTAAGTGGCGCACATTGAAGGCATGTTCCATCTGGGAGGGGCATCGTTGCCGTGACAGTGTTGAGTCAGTTGGTCTGTGTGAAATAGAGGGTTTTCATCCGGTGCAGAAGGGAAACCTTTTCTTCGTTCTGAAAGCAGCTCTGCTGAGATGCGCAGGGCTCCGACACAGCGGAGGTCGCGATAGACTGCTGGTGAATTACAATTGATACGAAAGCCACCATGATGAACGAGGGgctttttatctattttttttcgTGTATCACGAATTACCACACGTTAAATTAAACAAGGTTTCTTCCGGGGAGCATTTTGTCCTGCGGTCTCAGGCAGGAATGATTGTTCTTGGCTTTGTTTTGCTACAGAGGACCATGGAGACCTCCGAAGGAATCGGTCATGCTCTCTGGTGAGAGCGTGGCCTGGAGCGAGAGTTGTAAAGTCCCCAGAATTACATCACATGGAGGTCAAAGGACATCTGATCACATCCATGGGTTTGGGGGCTCCTGATGTTCAAGGCTGCCAGGACAGCAAGTTGCAGGCTGAGAGGGTTGCAGCTCTGCAAGAGAGGAAGCAAGCCCTGGAGGCCCTCCTCAACACCAGAGTGGGGGAGCTCAAACAAGTCTGTTTGCTGGAAGCAGAGCTGACTGGGAAGTTGCCACATACTTTCCCCCTGGAGACGGGAGAGAAACCCCCACTGGTGCAGCGCAGAGCTGGCCTGGCAACCAACACCAAGGCAGAGGATGAGGCTGCCCAAAGAAAGCAGATGAAAGCCATCTTCACCGGTGCTCTGTACAGACACTCAGAATCAGACCGAAATATCCCAAATAGCAAGAGGACAGTTCATCGGGGGTGTCACACAgAGGACACTGTCATGTCAGAGAGTACAAGCTCCATGTCAGATTCAACATCCCATGACAACGAGTCTTCTCCCAGTGTTGCGGCTGACCAGCGCTCTCTGTCTCAGCCCCGGCTCACCGTGGGCAGCCCTGACCACAGGATCAGCAGGAAGCTGTCGCCAGTCGAGATTTACTATGAGATGAGGACACGCCGCAACTCTGTCACAAGCTCTGTTAGCCCAACTCACTCTTTACCCAGAAGTGCATCTAACATTGAAGGGAGAAGTGTACCAGCTACTCCTCTGTTGGCCCGAACTGCTCCAATCAGCGTTCACGTCAGGTCAGATGTGTCGGGTGGTAATGTGTTGAAGCAGTGGTCTGGCAGCCTGGATGTGCCCTATATGATTCCACTGGCCCAGGAGGGCTCTTCTTCTGACCGCCGAGGCTGCCCTTACAGCTCCCGGGCCAGGCGCAGTAACAGCTCCGAGGCCCTGCTGGATAGATCAAGCCTCCCTGACGATCCTGCTCCCAGAAACGGGATGCCCCCCAGAGGAGGGCCCTACAAGAGCTCAGAGACACTGACTGATGGCAAGCTGCGACACATTCACCTGGGCAGCCCTGAGAGACATGTTGATGGCTCTGTGGACCAGGCCAAAATGCGTCTGTCCATGGGTGACAGAGGGGCTGGTGGAGGCTACAATGAGCTATTGATGGACTATATCTGGGGGAAACAGCAGAGGATGCAAGTGCAGCACCACCTGTACCAGTCCACAGGCAGGATCTGGCAGGACATGTCCTCCCCTCGCTCCTCCACTGCGGCGGTGCCTCCCCATGCCAATGGCTTTTCCCATTCCCAGGTGCACCTCCCCAGCGCTGCACCACCTTACAGCCCCATGGTGCTCCGAGGGTCCCAAGCTGAGCTGCGCAGGGTCAAAGTCACCAGAACCAAATCTTGTGGACCCTTTATTCCTTTGCAGCAACATTCCCAGGATGCCATCCTGCTGTCAGCGTACGAGTCTCCCCTGCCTGCCTCTGGCACCACCACATCCTCCATCCCCAACCTGCACCCCTACCAGACCGAGCTGTCTGGCCCCTCGTTTAGCCGCAGACCCCCACAGTTCTCTCTCCCAACCCCAGAAGACTCAACGCGAAGCTTACATAAAGCCTTGGCTCTAGAGGGACTGAGGGACTGGTACCTAAGAAACGCCCTTGGCTATCCTCCTGCTGCCTCAAAGGGCCATGAGGCAGGGATCTCTCGTCTATCACACCCCCACCCGCTGGTGCACCAGGCCCAGTCTGTTCAAGGTGAACCAGCCAACCTCCACAGATCTCAGATACCCCAGTCAGCCAGCTTCCATGGTCACCCGCTGCATGGAAGGTCGATGGAATTCTCGCTCTATCAGGAGACTCCTCATCCACAGATGCAAGAGGTGACCCCAAAGGAACCCAGTGCAGACCCAGGCACCCTAGTCTGAAgcagcagaacacacacacacacacacactacaaaatCTGAGCAAAAACACTGtagcctcacacacacatccactcaGACTCACAtagtcgcacacacacacaagttgatACAATGTGACCTCAACAGCAAAGCAAAACACAGCAACCTCAGCAGAAAGAGACTGGAAAATATGACAAACTGTAGCTGTACAGTGTGAAAAAGCCTTGGCAAGTTCCCCGTGTTCTAACTGATCCCACCAGTATATGAACTTCAAACCCAGTATTCTCATGTAGATGTGCACTGGAGTTGACTCATCTAATAACAATATGGTCATGTTGTActtaatatatcaatatttcgGGTCCAACACGAGCAGTAAAATCCTTCCTAATAACCCTGAAAAGTCTCCCGAGATATACTTTTTTACAGAATATATACAACTCTAAATTACTATTTTGTATCTTCTGAGATATAAAGAACAGCTATATTAAAGAGGTAATTTATTGCTCATTAATCTTGTGATATACAAAGATGTTATATGAGCTCACATCATTTGAAAAGTATTAATACATGccagtgaatgtgtgtttgtaaacTGTATAAAACGCAAAAAAACATGCTTCAGTCTTCATCTGCCGTTAATTTCACAGCcatttgtatttttcatttttaataaataaaaggggCCACGAACTAGTGTACTGGTGTAGCAGACGGGAGTGCCTAAATGTTTTAATATCAAAACTAAACCTTGGTTGGAAAACTTTGAAGTGCTTTCTAATAATCTGAAATGCTAGCATTAAGCCTTTGTTAGCTTAGTCTAGTCAAAAACTGAAAGCAGTTCACGATGTCACTAAATTTGGATATTTGGAATGATGTCATATATATTGTGATTTTTCTGTATATTTTCTAGATTCAGCTTAGTGCTGGCAAATAAATGTAGCTTTCTCTGTGTTGACCTTGACAAAACAATTAGACCAGTTTTTGGAAAAATCCTGAGGGCTGTTGTGAAATCTACTGTTGGGCAGTAGCACATGACTGTATGACAATTATTTACTCATATCAAATcagttttttctgcatttagtTGTGGAGGATTTGAGTGTCATATGGAGCACTTTATGAACATCTTAAGCCTTAATTCCCTATAAATTTGTCACCAAAAGAAATGACAGGCAGTAGACTAGGTTTATAATTGGGAGCAAAAAATAAGTGAGTTTTGTCGACATCTACTGAAAGTCTATCTGAATGTTAGTCTGTATATAGCGTTGATTGTACTGATGAGTTTCAAGCTGATGTTTTATTCCCGTACTAACAAGGTAATTTTTAAACAAACCACATGataagtaattaattaataagctCCCCCACTATTTCCAACCCCCAAGTGAGCACTATTTAATTGGTTGTAAAATACGAGGTAGGTGGTGTGAACAGAATAGGGCTGCGGCAGTTTTGAATGACTGTGTGAGCAGGTCTCATACCAGTATATTTGTTAATGAGAATTCATGCTGGCTGATTTTTGTATTTGAAATGATTTCACAACATTTAATGTGCTTAGTTttgtgttgttaaaaaaaaaaatgct
>XM_039797114.1
CAGGATTAAGTGGCGCACATTGAAGGCATGTTCCATCTGGGAGGGGCATCGTTGCCGTGACAGTGTTGAGTCAGTTGGTCTGTGTGAAATAGAGGGTTTTCATCCGGTGCAGAAGGGAAACCTTTTCTTCGTTCTGAAAGCAGCTCTGCTGAGATGCGCAGGGCTCCGACACAGCGGAGGTCGCGATAGACTGCTGGTGAGAGCGTGGCCTGGAGCGAGAGTTGTAAAGTCCCCAGAATTACATCACATGGAGGTCAAAGGACATCTGATCACATCCATGGGTTTGGGGGCTCCTGATGTTCAAGGCTGCCAGGACAGCAAGTTGCAGGCTGAGAGGGTTGCAGCTCTGCAAGAGAGGAAGCAAGCCCTGGAGGCCCTCCTCAACACCAGAGTGGGGGAGCTCAAACAAGTCTGTTTGCTGGAAGCAGAGCTGACTGGGAAGTTGCCACATACTTTCCCCCTGGAGACGGGAGAGAAACCCCCACTGGTGCAGCGCAGAGCTGGCCTGGCAACCAACACCAAGGCAGAGGATGAGGCTGCCCAAAGAAAGCAGATGAAAGCCATCTTCACCGGTGCTCTGTACAGACACTCAGAATCAGACCGAAATATCCCAAATAGCAAGAGGACAGTTCATCGGGGGTGTCACACAgAGGACACTGTCATGTCAGAGAGTACAAGCTCCATGTCAGATTCAACATCCCATGACAACGAGTCTTCTCCCAGTGTTGCGGCTGACCAGCGCTCTCTGTCTCAGCCCCGGCTCACCGTGGGCAGCCCTGACCACAGGATCAGCAGGAAGCTGTCGCCAGTCGAGATTTACTATGAGATGAGGACACGCCGCAACTCTGTCACAAGCTCTGTTAGCCCAACTCACTCTTTACCCAGAAGTGCATCTAACATTGAAGGGAGAAGTGTACCAGCTACTCCTCTGTTGGCCCGAACTGCTCCAATCAGCGTTCACGTCAGGTCAGATGTGTCGGGTGGTAATGTGTTGAAGCAGTGGTCTGGCAGCCTGGATGTGCCCTATATGATTCCACTGGCCCAGGAGGGCTCTTCTTCTGACCGCCGAGGCTGCCCTTACAGCTCCCGGGCCAGGCGCAGTAACAGCTCCGAGGCCCTGCTGGATAGATCAAGCCTCCCTGACGATCCTGCTCCCAGAAACGGGATGCCCCCCAGAGGAGGGCCCTACAAGAGCTCAGAGACACTGACTGATGGCAAGCTGCGACACATTCACCTGGGCAGCCCTGAGAGACATGTTGATGGCTCTGTGGACCAGGCCAAAATGCGTCTGTCCATGGGTGACAGAGGGGCTGGTGGAGGCTACAATGAGCTATTGATGGACTATATCTGGGGGAAACAGCAGAGGATGCAAGTGCAGCACCACCTGTACCAGTCCACAGGCAGGATCTGGCAGGACATGTCCTCCCCTCGCTCCTCCACTGCGGCGGTGCCTCCCCATGCCAATGGCTTTTCCCATTCCCAGGTGCACCTCCCCAGCGCTGCACCACCTTACAGCCCCATGGTGCTCCGAGGGTCCCAAGCTGAGCTGCGCAGGGTCAAAGTCACCAGAACCAAATCTTGTGGACCCTTTATTCCTTTGCAGCAACATTCCCAGGATGCCATCCTGCTGTCAGCGTACGAGTCTCCCCTGCCTGCCTCTGGCACCACCACATCCTCCATCCCCAACCTGCACCCCTACCAGACCGAGCTGTCTGGCCCCTCGTTTAGCCGCAGACCCCCACAGTTCTCTCTCCCAACCCCAGAAGACTCAACGCGAAGCTTACATAAAGCCTTGGCTCTAGAGGGACTGAGGGACTGGTACCTAAGAAACGCCCTTGGCTATCCTCCTGCTGCCTCAAAGGGCCATGAGGCAGGGATCTCTCGTCTATCACACCCCCACCCGCTGGTGCACCAGGCCCAGTCTGTTCAAGGTGAACCAGCCAACCTCCACAGATCTCAGATACCCCAGTCAGCCAGCTTCCATGGTCACCCGCTGCATGGAAGGTCGATGGAATTCTCGCTCTATCAGGAGACTCCTCATCCACAGATGCAAGAGGTGACCCCAAAGGAACCCAGTGCAGACCCAGGCACCCTAGTCTGAAgcagcagaacacacacacacacacacactacaaaatCTGAGCAAAAACACTGtagcctcacacacacatccactcaGACTCACAtagtcgcacacacacacaagttgatACAATGTGACCTCAACAGCAAAGCAAAACACAGCAACCTCAGCAGAAAGAGACTGGAAAATATGACAAACTGTAGCTGTACAGTGTGAAAAAGCCTTGGCAAGTTCCCCGTGTTCTAACTGATCCCACCAGTATATGAACTTCAAACCCAGTATTCTCATGTAGATGTGCACTGGAGTTGACTCATCTAATAACAATATGGTCATGTTGTActtaatatatcaatatttcgGGTCCAACACGAGCAGTAAAATCCTTCCTAATAACCCTGAAAAGTCTCCCGAGATATACTTTTTTACAGAATATATACAACTCTAAATTACTATTTTGTATCTTCTGAGATATAAAGAACAGCTATATTAAAGAGGTAATTTATTGCTCATTAATCTTGTGATATACAAAGATGTTATATGAGCTCACATCATTTGAAAAGTATTAATACATGccagtgaatgtgtgtttgtaaacTGTATAAAACGCAAAAAAACATGCTTCAGTCTTCATCTGCCGTTAATTTCACAGCcatttgtatttttcatttttaataaataaaaggggCCACGAACTAGTGTACTGGTGTAGCAGACGGGAGTGCCTAAATGTTTTAATATCAAAACTAAACCTTGGTTGGAAAACTTTGAAGTGCTTTCTAATAATCTGAAATGCTAGCATTAAGCCTTTGTTAGCTTAGTCTAGTCAAAAACTGAAAGCAGTTCACGATGTCACTAAATTTGGATATTTGGAATGATGTCATATATATTGTGATTTTTCTGTATATTTTCTAGATTCAGCTTAGTGCTGGCAAATAAATGTAGCTTTCTCTGTGTTGACCTTGACAAAACAATTAGACCAGTTTTTGGAAAAATCCTGAGGGCTGTTGTGAAATCTACTGTTGGGCAGTAGCACATGACTGTATGACAATTATTTACTCATATCAAATcagttttttctgcatttagtTGTGGAGGATTTGAGTGTCATATGGAGCACTTTATGAACATCTTAAGCCTTAATTCCCTATAAATTTGTCACCAAAAGAAATGACAGGCAGTAGACTAGGTTTATAATTGGGAGCAAAAAATAAGTGAGTTTTGTCGACATCTACTGAAAGTCTATCTGAATGTTAGTCTGTATATAGCGTTGATTGTACTGATGAGTTTCAAGCTGATGTTTTATTCCCGTACTAACAAGGTAATTTTTAAACAAACCACATGataagtaattaattaataagctCCCCCACTATTTCCAACCCCCAAGTGAGCACTATTTAATTGGTTGTAAAATACGAGGTAGGTGGTGTGAACAGAATAGGGCTGCGGCAGTTTTGAATGACTGTGTGAGCAGGTCTCATACCAGTATATTTGTTAATGAGAATTCATGCTGGCTGATTTTTGTATTTGAAATGATTTCACAACATTTAATGTGCTTAGTTttgtgttgttaaaaaaaaaaatgct

Function

symbol description
ccdc120 Involved in microtubule anchoring at centrosome and protein localization. Located in centriole. Part of centriolar subdistal appendage.

NR:

description
PREDICTED: coiled-coil domain-containing protein 120

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039797113.1 True 3882 mRNA 0.47 10 7129351 7143644
XM_039797114.1 False 3670 mRNA 0.47 10 7129351 7143644

Neighbor

gene id symbol gene type direction distance location
LOC120557080 srpk3,LOC103365909,LOC100693513,LOC102304520,LOC101464872 coding downstream 1644 7116592 ~ 7127707 (-)
comtb comt coding downstream 13319 7109605 ~ 7116032 (-)
grm6b LOC103365912 coding downstream 20275 7089276 ~ 7109076 (-)
mon1a mon1a coding downstream 47704 7074919 ~ 7081647 (-)
mst1rb mst1r coding downstream 55450 7052122 ~ 7073901 (-)
cxxc1b LOC103365906 coding upstream 20057 7163701 ~ 7179013 (-)
tfe3b LOC104939489,LOC103365907 coding upstream 44033 7187677 ~ 7196736 (-)
gnl3l gnl3l coding upstream 53503 7197147 ~ 7205305 (-)
LOC120557297 LOC106531391 coding upstream 66444 7210088 ~ 7211900 (-)
LOC120557298 NA coding upstream 81852 7225496 ~ 7227311 (-)
G36423 NA non-coding downstream 26 7128713 ~ 7129325 (-)
G36414 NA non-coding downstream 7312 7121607 ~ 7122039 (-)
G36380 NA non-coding downstream 114806 7014311 ~ 7014545 (-)
G36366 NA non-coding downstream 253305 6875846 ~ 6876046 (-)
G36357 NA non-coding downstream 356893 6772238 ~ 6772458 (-)
G36425 NA non-coding upstream 2430 7146074 ~ 7147051 (-)
G36489 NA non-coding upstream 41535 7185179 ~ 7187208 (-)
G36499 NA non-coding upstream 128824 7272468 ~ 7272716 (-)
G36501 NA non-coding upstream 137174 7280818 ~ 7281850 (-)
G36513 LOC102798593,LOC102207353,LOC101485806,LOC102310803,LOC100696076,LOC103386310,LOC107100171 non-coding upstream 168780 7312424 ~ 7317087 (-)
LOC120558193 camkv,LOC102778568 other downstream 132634 6948075 ~ 6996717 (-)
ghrh ghrh,LOC108251004 other downstream 2215194 4906359 ~ 4914157 (-)
LOC120556780 LOC106958509,LOC106963510,LOC107690788,LOC107671222,LOC107579420 other downstream 2524857 4604118 ~ 4604494 (-)
LOC120557507 NA other downstream 2543906 4487787 ~ 4585445 (-)
apobec2a apobec2,LOC100696148,LOC102293474,LOC101160551,LOC102785934,LOC101475259 other downstream 2706973 4406456 ~ 4422378 (-)
mbd1b NA other upstream 4347 7147991 ~ 7161998 (-)
si:dkeyp-97e7.9 LOC103365916,LOC104945761 other upstream 185822 7329466 ~ 7334361 (-)
arhgap46a LOC103358831 other upstream 385025 7528669 ~ 7593448 (-)
LOC120557337 LOC104966450 other upstream 524020 7667664 ~ 7704445 (-)
LOC120557774 ucn2,LOC104952568,LOC108241195,LOC106518500,LOC100704776 other upstream 1269082 8412726 ~ 8414933 (-)

Expression


Co-expression Network