trnae-cuc_1


Basic Information

Item Value
gene id trnae-cuc_1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 3281955 ~ 3282026 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_178
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCTCTCACCGccgcggcccgggttcgattcccggtCAGGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_178 True 72 tRNA 0.65 1 3281955 3282026

Neighbor

gene id symbol gene type direction distance location
elk4 elk4,LOC103386491,LOC102779953 coding downstream 1238 3260738 ~ 3280717 (-)
LOC120556909 NA coding downstream 61234 3215462 ~ 3220721 (-)
mfsd4aa LOC102790596,LOC101468110,LOC102311398 coding downstream 169449 3093726 ~ 3112506 (-)
LOC120556710 NA coding downstream 320634 2958881 ~ 2961321 (-)
LOC120557398 NA coding downstream 426130 2787737 ~ 2855825 (-)
si:ch211-117k10.3 NA coding upstream 12520 3294546 ~ 3307158 (-)
cldn19 cldn19 coding upstream 388664 3670690 ~ 3694708 (-)
p3h1 p3h1 coding upstream 446998 3729024 ~ 3754264 (-)
ap5b1 NA coding upstream 515625 3797651 ~ 3805065 (-)
efcc1 efcc1 coding upstream 583488 3865514 ~ 3890690 (-)
G35662 NA non-coding downstream 44809 3235318 ~ 3237146 (-)
G35680 NA non-coding downstream 53681 3227523 ~ 3228274 (-)
G35667 NA non-coding downstream 126780 3154763 ~ 3155175 (-)
G35670 NA non-coding downstream 152407 3129232 ~ 3129548 (-)
G35663 NA non-coding downstream 213689 3044458 ~ 3068266 (-)
G35693 NA non-coding upstream 166285 3448311 ~ 3448728 (-)
G35697 NA non-coding upstream 234057 3516083 ~ 3551902 (-)
G35709 NA non-coding upstream 290358 3572384 ~ 3641419 (-)
G35713 NA non-coding upstream 361734 3643760 ~ 3644062 (-)
G35716 NA non-coding upstream 382473 3664499 ~ 3664735 (-)
cdk18 cdk18,LOC101468598,LOC102310375 other downstream 75192 3115239 ~ 3206763 (-)
G35647 LOC104965637,LOC100711663,LOC107385065,LOC102300449 other downstream 328848 2887992 ~ 2953107 (-)
G35645 NA other downstream 397774 2881881 ~ 2884181 (-)
tma7 NA other downstream 418432 2858977 ~ 2863523 (-)
c1qb NA other downstream 525339 2749412 ~ 2756616 (-)
cfap57 NA other upstream 550082 3832108 ~ 3862427 (-)
iqsec1b iqsec1,LOC101485759,LOC104921976 other upstream 662198 3944224 ~ 4190732 (-)
apobec2a apobec2,LOC100696148,LOC102293474,LOC101160551,LOC102785934,LOC101475259 other upstream 1124430 4406456 ~ 4422378 (-)
LOC120557507 NA other upstream 1205761 4487787 ~ 4585445 (-)
LOC120556780 LOC106958509,LOC106963510,LOC107690788,LOC107671222,LOC107579420 other upstream 1322092 4604118 ~ 4604494 (-)

Expression


Co-expression Network