LOC120556710


Basic Information

Item Value
gene id LOC120556710
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 2958881 ~ 2961321 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039796391.1
CTAGGAAAACATTTGTTATTCAAAGGAGAGACGCACAGAGCGGTCGATAAGATTGACAGTAACCTTCAGACCAAACTCACAAGGAAGCAGCTTCAGTAGGGGAATTATCGCAACTTCAACCTGCCACGAATCGAAGCACTGACtAGAGAAAATGGCTTCCCGGTCAGAGAAGGATCTCTCCTGTCCTGTCTGCCATGACATCTTTAAAGATCCTGTTGTCCTGTCatgtagccacagcttctgCAAAGACTGTCTGCAGAGATGGtggacagcaaaaaaaacaagggaATGTCCAATTTGTAAGAGAAGATCATCGAAGAGTCAACCACCCGTCAGTTTGGTTATAAAGAACCTGTGTGAGTCTTTCTTGCTGGACAGAGATCAGAGATCTTCAGAGGCGCTCTGCAGTCTGCACGCcgagaaactcaaactcttctgtctggaccatcGGCAGCGAGTGTGTGTCGTCTGTCGGgtttcaaaaacacacaacaaccacagatTCGTACTCATCGACGAAGCTGCACAGGATCACCGAGAGGAGCTCCACGAGTCCCTGAAGCCCTTACAGGAGAAACTGAAGCTCTGTCAACAAGTTAAAGGAAACTGGGATCAAACAGCAGAACACATGAAGGTCCAGGCCCGACGCACAGAGAGGCAGATTAAGGAGCAGTTTAAGAAGCTTCGCCAGTttctagaagaggaagaggaggccaggatCTCTGctctgagggaggaagaggagcagaagagtcagatgatgaaggagaagatggaggctctgagcagagagatagcagctctttcagacacagtcagagccacagaggagcagctgagagctgaagacgtctcattcctgatcaactacaGGGCTGCTGTGGAAAGAGTCCTGCAGCGCCCTCTGCTGgatgatccacagctgctctcaggagctctgatagacgaggccaaacacctgggcaacctgagcttcaacatctggaacaagatgaaggacatgGTCTCCTACACTCCTCTGATTCTGGATCCAAACACTGCTTATCCAGAACTCATCCTGTCTGAAGATCTGACCAGTGTGAGatgtggagagagacagaagctTCCTGATAacccagagaggtttgactgcTATCGCATCgtcctgggctctgagggcttCAACTCCGGGACTCACCGCTGGGACGTTGAGGTTGGACACACTACCAGCTGGGTCGTGGGTGTGGCAGCAGAGTCCGTCCAAAGAAAGGGAGACATAGGCTTACGGTCTGGATTATGGGGAATGGGGCTCTGTCATAGTAAATACACAGCGTGTTCACCACCAGGTCCAGTCACTGTTCTCCCTGTGAAGAAGAAGCTCCGCAGGATcagagtgactctggactggTACAGATGCAGTCTGTCGTTCTCTGATCctgacactgacacacacattcacaccttcacacacactttcactgagagGCTGTTTCCGTACTTTAGTAATCTGAATCCATTGCCACTGAAGATATCGCCAGTTAACGTCTCTGTAACACTGAACTGAGTTAATCAAGAAAAAGATGATGATGGCGATGACGACAACGACGACAACGATGATGACAGACCCAACTGAAATCTATATAttgttatttgtttaatatCTGCGGAAGATCCGCGGAAAATCTGCAGAAGATCTgttgaaaatctgcagaaaatctgcagaaaatCTGTTGAAAATTTGcagaaaatctgcagaaaatCTGTTGAAAATTTGCAGAAAATCTGTTGAAGATCTGcagaaaatctgcagaaaatCTGTTGAAGATCTGcagaaaatctgcagaaaatctgctgctgctgctgatgacaGACCCAAATGAAATCtgaatttttcatttgtttaatatCTGCAGAAGATCTGCAGAAGATCGGTGGTATTCTGCGTCCGCAGATTGCGTGTGGCCCTGATGAGAACAAAGTCACAGAGTTTAGTCGTTGGTGTCAGAATGAAACCTAATTCATCAGCAATATAGTTCATATAAAGGCAGTCAATTAATCAGACAGgagccattttattttaaaaatcatatttttttaatttgaaaacgTTTTTATGGCGACCCAAAGTGCTCAATGTGAATTCAATGAatacaaaattataaaataaaaattatgtaTGAATAAATGCTGACCAAATATGTCTAATATGTCCAATGAACTTGTGAAACAATTCAAtaaattagtattttttttttaaaacatgttatGTTATCCTGCTTTTTTCCACACTGAGAGTTCACTAAatgtcattttcattttgtgcaaatgttttatttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039796391.1 True 2316 mRNA 0.44 2 2958881 2961321

Neighbor

gene id symbol gene type direction distance location
LOC120557398 NA coding downstream 103056 2787737 ~ 2855825 (-)
LOC120557399 NA coding downstream 172143 2778453 ~ 2786738 (-)
LOC120557394 NA coding downstream 184412 2765266 ~ 2774469 (-)
pck1 pck1 coding downstream 1089044 1856113 ~ 1869837 (-)
LOC120556728 NA coding downstream 1274578 1677230 ~ 1684303 (-)
mfsd4aa LOC102790596,LOC101468110,LOC102311398 coding upstream 132405 3093726 ~ 3112506 (-)
LOC120556909 NA coding upstream 254141 3215462 ~ 3220721 (-)
elk4 elk4,LOC103386491,LOC102779953 coding upstream 299417 3260738 ~ 3280717 (-)
trnae-cuc_1 NA coding upstream 320634 3281955 ~ 3282026 (-)
si:ch211-117k10.3 NA coding upstream 333225 3294546 ~ 3307158 (-)
G35646 NA non-coding downstream 72234 2886354 ~ 2886647 (-)
G35642 NA non-coding downstream 84417 2873459 ~ 2874464 (-)
G35539 NA non-coding downstream 211118 2747344 ~ 2747763 (-)
G35540 NA non-coding downstream 212073 2746234 ~ 2746808 (-)
G35537 NA non-coding downstream 216075 2742470 ~ 2742806 (-)
G35658 NA non-coding upstream 8056 2969377 ~ 2969705 (-)
G35663 NA non-coding upstream 83137 3044458 ~ 3068266 (-)
G35670 NA non-coding upstream 167911 3129232 ~ 3129548 (-)
G35667 NA non-coding upstream 193442 3154763 ~ 3155175 (-)
G35680 NA non-coding upstream 266202 3227523 ~ 3228274 (-)
G35647 LOC104965637,LOC100711663,LOC107385065,LOC102300449 other downstream 5774 2887992 ~ 2953107 (-)
G35645 NA other downstream 74700 2881881 ~ 2884181 (-)
tma7 NA other downstream 95358 2858977 ~ 2863523 (-)
c1qb NA other downstream 202265 2749412 ~ 2756616 (-)
raly raly other downstream 638857 2098759 ~ 2320024 (-)
cdk18 cdk18,LOC101468598,LOC102310375 other upstream 153918 3115239 ~ 3206763 (-)
nucks1a nucks1 other upstream 282912 3244233 ~ 3427233 (-)
cfap57 NA other upstream 870787 3832108 ~ 3862427 (-)
iqsec1b iqsec1,LOC101485759,LOC104921976 other upstream 982903 3944224 ~ 4190732 (-)
apobec2a apobec2,LOC100696148,LOC102293474,LOC101160551,LOC102785934,LOC101475259 other upstream 1445135 4406456 ~ 4422378 (-)

Expression


Co-expression Network