G35540


Basic Information

Item Value
gene id G35540
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 2746234 ~ 2746808 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU47553
GAGACTTTgccatgggactgcagggccagggatcaaaccaccgaCCTTTCAATTGGTATATACTATACTACACTGTAGCTTTAAGTCCGTATTTGTcttatagttttaaaaaggaTGATCTTGCCTTCTCTTTATCGCTGCGTCCGTCCTGTAAATATGTCCATTTATCTGCATAATAGGAATAAAACTGCATTGCTTGACGGAAGCTTGTGGAGCTACTATGACTAtgataaaatatttattgttgTGGTGTGTAACATTTCCTCCAGTAGGTCAATTTTCAAAAACACTGAGGTTTCAGGTGTACATCTTTCCGAGTGATACCAGGCCAGGAGTTCATTAATTATCCATCAGACAGTATCAGGTTGGTAGACACTTAACCTTACAGCTGTGTGGACGGTTAACAAAAGTAAGTAAAAGCACAAAAAGTAGAGGTACAAAAAGTAGAAGCTCATTATTCCCACAAATAACCTGAATGGATCACTGTATGAATATTCTAATAGAATATGTTTCAGAGTTGTTATATCTAACCTATCATTGCTCCTTGGGTTGTTGTCTAACATCTGACACTAAAG

Function

GO:

id name namespace
GO:0022804 active transmembrane transporter activity molecular_function
GO:0015291 secondary active transmembrane transporter activity molecular_function
GO:0008271 secondary active sulfate transmembrane transporter activity molecular_function
GO:1901682 sulfur compound transmembrane transporter activity molecular_function
GO:0015116 sulfate transmembrane transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47553 True 575 lncRNA 0.38 1 2746234 2746808

Neighbor

gene id symbol gene type direction distance location
pck1 pck1 coding downstream 876397 1856113 ~ 1869837 (-)
LOC120556728 NA coding downstream 1061931 1677230 ~ 1684303 (-)
ccndbp1 ccndbp1 coding downstream 1070716 1658255 ~ 1675518 (-)
klhdc8a klhdc8a,LOC100707086 coding downstream 1212677 1469573 ~ 1533557 (-)
slc41a1 slc41a1,LOC102789620,LOC102314684 coding downstream 1297330 1415000 ~ 1448904 (-)
LOC120557394 NA coding upstream 18458 2765266 ~ 2774469 (-)
LOC120557399 NA coding upstream 31645 2778453 ~ 2786738 (-)
LOC120557398 NA coding upstream 40929 2787737 ~ 2855825 (-)
LOC120556710 NA coding upstream 212073 2958881 ~ 2961321 (-)
mfsd4aa LOC102790596,LOC101468110,LOC102311398 coding upstream 346918 3093726 ~ 3112506 (-)
G35537 NA non-coding downstream 3428 2742470 ~ 2742806 (-)
G35530 flnb,LOC102792624 non-coding downstream 14900 2728059 ~ 2731334 (-)
G35523 NA non-coding downstream 19417 2709484 ~ 2726817 (-)
G35528 NA non-coding downstream 24953 2720368 ~ 2721281 (-)
G35521 NA non-coding downstream 39347 2705895 ~ 2706887 (-)
G35539 NA non-coding upstream 536 2747344 ~ 2747763 (-)
G35642 NA non-coding upstream 126651 2873459 ~ 2874464 (-)
G35646 NA non-coding upstream 139546 2886354 ~ 2886647 (-)
G35648 NA non-coding upstream 162380 2909188 ~ 2984472 (-)
G35658 NA non-coding upstream 222569 2969377 ~ 2969705 (-)
raly raly other downstream 426210 2098759 ~ 2320024 (-)
snrpe ruxe,snrpe other downstream 1497316 1244017 ~ 1248918 (-)
G35168 NA other downstream 1724110 1021626 ~ 1022124 (-)
G35113 NA other downstream 1912471 706097 ~ 833763 (-)
LOC120558119 LOC104943678 other downstream 2117941 579928 ~ 628293 (-)
c1qb NA other upstream 2604 2749412 ~ 2756616 (-)
tma7 NA other upstream 112169 2858977 ~ 2863523 (-)
G35645 NA other upstream 135073 2881881 ~ 2884181 (-)
G35647 LOC104965637,LOC100711663,LOC107385065,LOC102300449 other upstream 141184 2887992 ~ 2953107 (-)
cdk18 cdk18,LOC101468598,LOC102310375 other upstream 368431 3115239 ~ 3206763 (-)

Expression


Co-expression Network