G35530 (flnb,LOC102792624)


Basic Information

Item Value
gene id G35530
gene name flnb,LOC102792624
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 2728059 ~ 2731334 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU47543
GGCGGAGTCTCCCTTACCGGCCTTGCTGCAGTCTACGGAGAAGTTGCTTCTCTGGCCCACGAAGGCCTTGCTGAGGCCGGGACCTCGGCTCATCACCTTGCTGGCGTCCGAGTCGCCCAGCCTGGGCATGGCACTCTGGGTGAAGCTGCTGCTGGAAGCCCGTACTGCTGGATCCACCGTCAGGGTCGAAGTCTCGCTGGCGTTGGTCACATTCACCAGCCGAGAacCTGTGACTTTGGCCTTGAAGGGACTGCCATTGATGTGGTTCGGTCCTCCGTATTTGATGCTGATCAGGTAGTTTCCAGGCGCCATGGGGGTGTACTGCACCTTGTAGCCCTCTGGAACCTCCTTGCAGTCCATCTTTACCTTGGACGGACCCTCGATGGTCACGGACAAGGCCCCGGGGCCCGCCTTAGTGTTGTTAATGACGAACTCTGACTGGCTACCTG

Function

symbol description
flnb Predicted to enable actin binding activity. Predicted to act upstream of or within actin cytoskeleton organization and cell differentiation. Human ortholog(s) of this gene implicated in Larsen syndrome; bone development disease (multiple); cleft palate; and spinal disease (multiple). Orthologous to human FLNB (filamin B).

NR:

description
PREDICTED: filamin-B-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47543 True 449 lncRNA 0.60 2 2728059 2731334

Neighbor

gene id symbol gene type direction distance location
pck1 pck1 coding downstream 858222 1856113 ~ 1869837 (-)
LOC120556728 NA coding downstream 1043756 1677230 ~ 1684303 (-)
ccndbp1 ccndbp1 coding downstream 1052541 1658255 ~ 1675518 (-)
klhdc8a klhdc8a,LOC100707086 coding downstream 1194502 1469573 ~ 1533557 (-)
slc41a1 slc41a1,LOC102789620,LOC102314684 coding downstream 1279155 1415000 ~ 1448904 (-)
LOC120557394 NA coding upstream 33932 2765266 ~ 2774469 (-)
LOC120557399 NA coding upstream 47119 2778453 ~ 2786738 (-)
LOC120557398 NA coding upstream 56403 2787737 ~ 2855825 (-)
LOC120556710 NA coding upstream 227547 2958881 ~ 2961321 (-)
mfsd4aa LOC102790596,LOC101468110,LOC102311398 coding upstream 362392 3093726 ~ 3112506 (-)
G35523 NA non-coding downstream 1242 2709484 ~ 2726817 (-)
G35528 NA non-coding downstream 6778 2720368 ~ 2721281 (-)
G35521 NA non-coding downstream 21172 2705895 ~ 2706887 (-)
G35496 NA non-coding downstream 43348 2646787 ~ 2684711 (-)
G35482 NA non-coding downstream 47741 2590130 ~ 2680318 (-)
G35537 NA non-coding upstream 11136 2742470 ~ 2742806 (-)
G35540 NA non-coding upstream 14900 2746234 ~ 2746808 (-)
G35539 NA non-coding upstream 16010 2747344 ~ 2747763 (-)
G35642 NA non-coding upstream 142125 2873459 ~ 2874464 (-)
G35646 NA non-coding upstream 155020 2886354 ~ 2886647 (-)
raly raly other downstream 408035 2098759 ~ 2320024 (-)
snrpe ruxe,snrpe other downstream 1479141 1244017 ~ 1248918 (-)
G35168 NA other downstream 1705935 1021626 ~ 1022124 (-)
G35113 NA other downstream 1894296 706097 ~ 833763 (-)
LOC120558119 LOC104943678 other downstream 2099766 579928 ~ 628293 (-)
c1qb NA other upstream 18078 2749412 ~ 2756616 (-)
tma7 NA other upstream 127643 2858977 ~ 2863523 (-)
G35645 NA other upstream 150547 2881881 ~ 2884181 (-)
G35647 LOC104965637,LOC100711663,LOC107385065,LOC102300449 other upstream 156658 2887992 ~ 2953107 (-)
cdk18 cdk18,LOC101468598,LOC102310375 other upstream 383905 3115239 ~ 3206763 (-)

Expression


Co-expression Network