G35648


Basic Information

Item Value
gene id G35648
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 2909188 ~ 2984472 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU47715
acctatctacagctaaaggagaccccacctatctacagctagaggagaccccacctatctacagctagaggagaccccacctatctccagctagaggagacctcacctatctccagctagaggagaccccacctatctacagctagaggagaccccacctatctacagctagaggagaccccaccctatctacagctagaggagaccccacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctacagctagaggagaccccacctatctacagctaggggagaccgtgatgagccctatttcaacaaacggtgg
>TU47719
acctatctacagctaaaggagaccccacctatctacagctagaggagaccccacctatctacagctagaggagaccccacctatctccagctagaggagacctcacctatctacagctagaggagacctcacctatctccagctagaggagaccccacctatctacagctagaggagaccccacctatctccagctagaggagacctcacctatctacagctaggggagaccccacctatctacagctagaggagaacccacctatctacagctagaggagaccccacctatctacagctagaggagacccc
>TU47721
acctatctacagctaaaggagaccccacctatctacagctagaggagaccccacctatctacagctagaggagaccccacctatctccagctagaggagacctcacctatctacagctagaggagaccccacctatctccagctagaggagaccccacctatctacagctagaggagacctcacctatctccagctagaggagaccccacctatctacagctagaggagaccccacctatctccagctagaggagacctcacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctacagctagaggagaacccacctatctacagctagg
>TU47723
acctatctacagctaaaggagaccccacctatctacagctagaggagaccccacctatctacagctagaggagaccccacctatctccagctagaggagacctcacctatctacagctagaggagaccccacctatctccagctagaggagaccccacctatctacagctagaggagaccccacctatctacagctagaggagaccccaccctatctacagctagaggagaccccacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctccagctagaggagaccccacctatctacagctagaggagacctcacctatctccagctagaggagaccccacctatctacagctagaggagaccccacctatctccagctagaggagacctcacctatctacagctaggggagaccccacctatctacagctagaggagaacccacctatctacagctagaggagaccccacctatctacagctagaggagacccc
>TU47724
acctatctacagctaaaggagaccccacctatctacagctagaggagaccccacctatctacagctagaggagaccccacctatctccagctagaggagacctcacctatctccagctagaggagacctcacctatctacagctagaggagaccctacctatctacagctagaggagaccccacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctacagctagaggagaacccacctatctacagctagg
>TU47725
acctatctacagctaaaggagaccccacctatctacagctagaggagaccccacctatctacagctagaggagaccccacctatctccagctagaggagacctcacctatctacagctagaggagaccccacctatctccagctagaggagaccccacctatctccagctagaggagaccccacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctacagctagaggagaccccacctatctacagctaggggagaccgtgatgagccctatttcaacaaacggtgg
>TU47726
acctatctacagctaaaggagaccccacctatctacagctagaggagaccccacctatctacagctagaggagaccccacctatctccagctagaggagacctcacctatctacagctagaggagacctcacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctacagctagaggagaccccacctatctacagctaggggagaccgtgatgagccctatttcaacaaacggtgg
>TU47727
acctatctacagctaaaggagaccccacctatctacagctagaggagaccccacctatctacagctagaggagaccccacctatctccagctagaggagacctcacctatctacagctagaggagaccccacctatctccagctagaggagaccccacctatctccagctagaggagaccccacctatctacagctagaggagaccccacctatctacagctagaggagaccccaccctatctacagctagaggagaccccacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctccagctagaggagaccccacctatctacagctagaggagacctcacctatctccagctagaggagaccccacctatctacagctagaggagaccccacctatctccagctagaggagacctcacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctacagctagaggagaacccacctatctacagctagg
>TU47734
acctatctacagctaaaggagaccccacctatctacagctagaggagaccccacctatctacagctagaggagaccccacctatctccagctagaggagacctcacctatctccagctagaggagaccccacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctacagctagaggagaccccacctatctacagctaggggagaccgtgatgagccctatttcaacaaacggtgg
>TU47735
gtttttttgtcttttgttggctcacttttactcacaacatgctaaccggcaacataggattccattcactacgctaagctaactagcggcggtgctgcaccggactaaaacgatgcatgcacaaaaaatgctttggcccacctatctacagctaggggagaccccacctatctacagctaggggagaccccacctatctacagctaggggagaccccacctatctacagctagaggagacccccacctatctacagctagaggagaccccacctatctacagctaggggagacctcacctatctacagctagaggagaccccacctatctacagctagaggagacctcacctatctacagctaggggagaccccacctatctacagctagaggagaccccacctatctacagctaggggagacctcacctatctacagctaggggagaccccacctatctacagctagaggagacctcacctatctacagctaggggagaccccacctatctacagctagaggagacctcacctatctccagctagaggagacctcacctatctacagctagaggagaccccacctatctccagctagaggagaccccacctatctccagctagaggagaccccacctatctccagctagaggagacctcacctatctacagctagaggagacctcacctatctacagctagaggagaccccacctatctacagctagaggagaacccacctatctacagctagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU47715 False 340 lncRNA 0.53 2 2983279 2983722
TU47719 False 312 lncRNA 0.54 3 2909188 2983722
TU47721 False 355 lncRNA 0.53 4 2909511 2983722
TU47723 False 521 lncRNA 0.54 5 2909188 2983722
TU47724 False 277 lncRNA 0.52 2 2909511 2983722
TU47725 False 313 lncRNA 0.53 3 2983279 2983722
TU47726 False 261 lncRNA 0.52 2 2983279 2983722
TU47727 False 538 lncRNA 0.54 5 2909511 2983722
TU47734 False 261 lncRNA 0.53 3 2983279 2983722
TU47735 True 755 lncRNA 0.53 5 2909511 2984472

Neighbor

gene id symbol gene type direction distance location
LOC120557398 NA coding downstream 53363 2787737 ~ 2855825 (-)
LOC120557399 NA coding downstream 122450 2778453 ~ 2786738 (-)
LOC120557394 NA coding downstream 134719 2765266 ~ 2774469 (-)
pck1 pck1 coding downstream 1039351 1856113 ~ 1869837 (-)
LOC120556728 NA coding downstream 1224885 1677230 ~ 1684303 (-)
mfsd4aa LOC102790596,LOC101468110,LOC102311398 coding upstream 109254 3093726 ~ 3112506 (-)
LOC120556909 NA coding upstream 230990 3215462 ~ 3220721 (-)
elk4 elk4,LOC103386491,LOC102779953 coding upstream 276266 3260738 ~ 3280717 (-)
trnae-cuc_1 NA coding upstream 297483 3281955 ~ 3282026 (-)
si:ch211-117k10.3 NA coding upstream 310074 3294546 ~ 3307158 (-)
G35646 NA non-coding downstream 22541 2886354 ~ 2886647 (-)
G35642 NA non-coding downstream 34724 2873459 ~ 2874464 (-)
G35539 NA non-coding downstream 161425 2747344 ~ 2747763 (-)
G35540 NA non-coding downstream 162380 2746234 ~ 2746808 (-)
G35537 NA non-coding downstream 166382 2742470 ~ 2742806 (-)
G35663 NA non-coding upstream 59986 3044458 ~ 3068266 (-)
G35670 NA non-coding upstream 144760 3129232 ~ 3129548 (-)
G35667 NA non-coding upstream 170291 3154763 ~ 3155175 (-)
G35680 NA non-coding upstream 243051 3227523 ~ 3228274 (-)
G35662 NA non-coding upstream 250846 3235318 ~ 3237146 (-)
G35645 NA other downstream 25007 2881881 ~ 2884181 (-)
tma7 NA other downstream 45665 2858977 ~ 2863523 (-)
c1qb NA other downstream 152572 2749412 ~ 2756616 (-)
raly raly other downstream 589164 2098759 ~ 2320024 (-)
snrpe ruxe,snrpe other downstream 1660270 1244017 ~ 1248918 (-)
cdk18 cdk18,LOC101468598,LOC102310375 other upstream 130767 3115239 ~ 3206763 (-)
nucks1a nucks1 other upstream 259761 3244233 ~ 3427233 (-)
cfap57 NA other upstream 847636 3832108 ~ 3862427 (-)
iqsec1b iqsec1,LOC101485759,LOC104921976 other upstream 959752 3944224 ~ 4190732 (-)
apobec2a apobec2,LOC100696148,LOC102293474,LOC101160551,LOC102785934,LOC101475259 other upstream 1421984 4406456 ~ 4422378 (-)

Expression


Co-expression Network