trnac-gca_5


Basic Information

Item Value
gene id trnac-gca_5
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 35909697 ~ 35909768 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>unassigned_transcript_207
GGGGGTatagctcagtggtagagcatttGACTGCAGATCAAGAGGTCCCCAGTTCAACTCTGGGTGCCCCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_207 True 72 tRNA 0.56 1 35909697 35909768

Neighbor

gene id symbol gene type direction distance location
cntn2 cntn2 coding downstream 42612 35767513 ~ 35867085 (-)
chia.1 LOC104933900,LOC107373588,LOC104958236,LOC101158848 coding downstream 167242 35732173 ~ 35742455 (-)
LOC120557762 LOC104933901,LOC104959214,LOC103386501 coding downstream 209804 35694000 ~ 35699893 (-)
LOC120556667 LOC104933902 coding downstream 223165 35681160 ~ 35686532 (-)
arfrp1 arfrp1 coding downstream 239852 35664108 ~ 35669845 (-)
LOC120556951 LOC104936970,LOC103367890 coding upstream 248669 36158437 ~ 36162553 (-)
zc3h11a LOC102787121 coding upstream 256780 36166548 ~ 36179403 (-)
zbtb40 zbtb40,LOC102786512,LOC104948952 coding upstream 346147 36255915 ~ 36274137 (-)
LOC120556965 NA coding upstream 417793 36327561 ~ 36357742 (-)
ldlrad2 LOC103373654 coding upstream 468162 36377930 ~ 36391465 (-)
G44107 NA non-coding downstream 20805 35888102 ~ 35888892 (-)
G43974 NA non-coding downstream 302817 35605706 ~ 35606880 (-)
G43964 NA non-coding downstream 376905 35532530 ~ 35532792 (-)
G43935 NA non-coding downstream 481016 35426403 ~ 35428681 (-)
G43942 NA non-coding downstream 493317 35415881 ~ 35416380 (-)
G44118 NA non-coding upstream 247051 36156819 ~ 36157706 (-)
G44125 NA non-coding upstream 304205 36213973 ~ 36214198 (-)
G44139 LOC101157124,LOC108240302,LOC103373651 non-coding upstream 392262 36302030 ~ 36314676 (-)
G44140 NA non-coding upstream 407216 36316984 ~ 36324992 (-)
G44148 NA non-coding upstream 461359 36371127 ~ 36371359 (-)
trnac-gca_4 NA other downstream 1190 35908436 ~ 35908507 (-)
LOC120558078 LOC107663605,LOC107698917 other downstream 25281 35883232 ~ 35884416 (-)
si:ch73-267c23.10 LOC104930309,LOC102192274,LOC101472365,LOC100702990,LOC106959684,LOC103152714,LOC103465506,LOC104941013 other downstream 398949 35490824 ~ 35510748 (-)
slc2a10 slc2a10 other downstream 445162 35452005 ~ 35464535 (-)
setd5 setd5 other downstream 984586 34858822 ~ 34925111 (-)
trnac-gca_6 NA other upstream 1182 35910950 ~ 35911021 (-)
trnac-gca_7 NA other upstream 2434 35912202 ~ 35912273 (-)
trnac-gca_8 NA other upstream 3699 35913467 ~ 35913538 (-)
trnac-gca_9 NA other upstream 6228 35915996 ~ 35916069 (-)
trnac-gca_10 NA other upstream 7496 35917264 ~ 35917335 (-)

Expression


Co-expression Network