G43935


Basic Information

Item Value
gene id G43935
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 35426403 ~ 35428681 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU58943
attataatgctcattatgtttatttttgcactggatgactccaaatatgtaggagaactgttttagacaacacacatgcttgtgtagcattgctgtgggtgTAATATCAATACATGACATTATTATtctgattattggcaaaagtgtctggactttttttgaaagaatttatgtattttgtcaactgttttatccagtatcaattctaaatactatcggtcgattaatcggttatcggCAAATACGGCCCAACCTAGCTATCGGTATCGGTAAAATCCACTATTGGTCGACCTCTAGAAaataggggttagggttaacaaaatatttacccCCATTCAACCACGTGAGACTCATAGTCCCAGTACTCCCTGGGCCGGTGAGTGTTGACCTCGGTGTACACTCGGGCCCGGCTTGGCACGGGTCCCGACATGTCCGACAGCTTGGCAGAGATGATGGGGAGATTTTACTGCAGCAGAGGAAGTACAGGGAGGAAGggtgggagagagggaggaagaggagggaaggTAGGGGTTGACCCAACGGGGCAAGGGtttggggatgggggggggaggCTTTGCCTGAGGATGGGGGGGGAGGGGCCACCAGGGGCAAGGTGGGATAGCTGACCCCTTGATCAATCCGACGACCGAAATGCTTCCCAGTAAGATGACTTTCGTGAAGCCAACGATCCTCGCCTCCCTCCGTcgcctctgtgtgtatgtgtgtgccagTGTGTGA

Function

GO: NA

KEGG:

id description
ko03013 Nucleocytoplasmic transport

RNA

RNA id representative length rna type GC content exon number start site end site
TU58943 True 738 lncRNA 0.49 2 35426403 35428681

Neighbor

gene id symbol gene type direction distance location
plxnb1b plxnb1,LOC102214007,LOC101475072,LOC103465508,LOC103373511 coding downstream 274600 34947770 ~ 35151803 (-)
si:dkey-19e4.5 LOC104930301,LOC103373509,LOC100704252,LOC104955611 coding downstream 488129 34926998 ~ 34938274 (-)
mtmr14 mtmr14 coding downstream 641019 34738030 ~ 34785384 (-)
si:dkey-156n14.3 LOC104932229 coding downstream 767197 34643322 ~ 34659206 (-)
LOC120557818 klf15 coding downstream 791685 34577458 ~ 34634718 (-)
LOC120557096 NA coding upstream 113821 35542502 ~ 35556629 (-)
LOC120557733 LOC104952937,LOC104935842,LOC103372836,LOC101471787,LOC100710053,LOC102777199,LOC102309213 coding upstream 136167 35564848 ~ 35579017 (-)
LOC120558074 NA coding upstream 160259 35588940 ~ 35617881 (-)
stmn3 stmn3 coding upstream 190687 35619368 ~ 35665708 (-)
arfrp1 arfrp1 coding upstream 235427 35664108 ~ 35669845 (-)
G43942 NA non-coding downstream 10023 35415881 ~ 35416380 (-)
LOC120557479 NA non-coding downstream 14015 35411964 ~ 35412388 (-)
G43938 NA non-coding downstream 22056 35404132 ~ 35404347 (-)
G43937 NA non-coding downstream 22886 35403266 ~ 35403517 (-)
LOC120557994 NA non-coding downstream 37776 35387897 ~ 35388627 (-)
G43964 NA non-coding upstream 103849 35532530 ~ 35532792 (-)
G43974 NA non-coding upstream 177025 35605706 ~ 35606880 (-)
G44107 NA non-coding upstream 459421 35888102 ~ 35888892 (-)
G44118 NA non-coding upstream 728138 36156819 ~ 36157706 (-)
G44125 NA non-coding upstream 785292 36213973 ~ 36214198 (-)
setd5 setd5 other downstream 501292 34858822 ~ 34925111 (-)
LOC120557811 fam120a other downstream 1472471 33911380 ~ 33953932 (-)
LOC120557840 svbp other downstream 1895536 33526497 ~ 33530867 (-)
LOC120557803 NA other downstream 2203145 33188068 ~ 33223258 (-)
podxl2 podxl2,LOC102777608 other downstream 2642567 32750792 ~ 32783836 (-)
slc2a10 slc2a10 other upstream 23324 35452005 ~ 35464535 (-)
si:ch73-267c23.10 LOC104930309,LOC102192274,LOC101472365,LOC100702990,LOC106959684,LOC103152714,LOC103465506,LOC104941013 other upstream 62143 35490824 ~ 35510748 (-)
LOC120558078 LOC107663605,LOC107698917 other upstream 454551 35883232 ~ 35884416 (-)
trnac-gca_4 NA other upstream 479755 35908436 ~ 35908507 (-)
trnac-gca_5 NA other upstream 481016 35909697 ~ 35909768 (-)

Expression


Co-expression Network