LOC120557803


Basic Information

Item Value
gene id LOC120557803
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 33188068 ~ 33223258 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU58177
GAAACCTGCAGAGATGCAGTGATCAGACAGAAGTGAAATAATCCGCTGGATTTTAATAATCTGACGGAGGATCTCAGCATCCAACAGCAACATCATGAAGAGCTTTCATCTACTCATCCTCTCACTGATGATAACAGGGGCCTCCTCGTTACCTGTAACCATATCTGTGGTCGTCTGTGTGGCTGTGCTGCTGGTGCTGCTCATTATGGTTCTCGTCTGGAAACGATTTCAGCGTTCAAAAGACACAAGAAATAGAGAACAGAACAATGAGGATGGTGCCTATGAGGAGATACAGGAGCGCCCCCAGAATCCGGACTCAGGAACTGCAATCAACACTATTTATCTCACAGCCAACTCTCCCACAAACCCCTCTGCCTCGCGgcattaggccggttacacactgccggcgtggtgtgagcgtggcgtttctgttgcgtgtcagctgcgtggatttttctatgtctttacacaccagaaacgtgtctgacgcggcgctgctgctgctggtcttgtctgtacacatgtatgtttcccattgataaaatgaaataccattttaaatataaatatatactgatttgattacagcaaagacaacgtcggcagtattgacggcaaagtaggctacagaatatttcattctgtattgacaggtgcaatattagaaaatcgatttttttttaaaattacattcatatatctgcATATATATCAAAACATAGAGGCTtgcaaacatcaacatgtcatttattaatatgcattagtgtctaaatgacatagaaacatattttcctattctattttgcctggaaacgcttccaacacgctcgcgtctcgcgtgaaaaataggcgtcggcaggagcggatctaccggggtggcatcGGGTGGCAactgccaccctaaaagaaagccttgccacccctgctgccaccccagttggcagcagcgaattacggtaaaagttatggccaatttgacCATATGTCCGACTgcagtgaatgcagcataagatGACGCCAGAGCTGAGACAgcctgttttgtttggaaaactgagtggcgctaagcgagggagccaggagtcgcgatgaatggagacacaggaggaaagaggtcaaAACGGATTAACATCTATCATGAGATGAAATTATAACGAAAGCACAGTGCTAGCATAGTTGCgatgctgattttgagatgataaaaatcaggttgaagaacgttatttcgccaactatacaatgttacttagggtctgacgtttgttctgtgtaaagtaggctacaaaagctaatattgattcaacgtctgtcaaggaaaacattgttactttgaatcttacagaaatgaagaggaCAGGTAgtatattcagtttttgtctccaaagagaaaggcgagagaaatagaaaatgaacaagtgagcaaggtagatggagaagatgaggtggaaggagagagaaaagaggtggaaggagagagagaagaggtggaaggagagagaaaagggcaacAGAAACGCGACAGACAGAGTACAAGGCCAAGGCGaccagggacaggaggaggtgggagaagaccacagcggtgaagatatggagggagagcatcaccgagaggaggagggagaaagcgagagaaagtgcagggctcagacagtgaaagggaaagcagagtgcctgggccatcaccaaccatctccagtcaagctggtccacacggtatggaaattgttgatgcatagtatactaagttagatatgaataagaacaacaaatgacaaagcttaaagggatacttcaccgatttagcattcagctttgtatcagtagaaacccgatagtatttctgaatgaccgagTTTCCCTCCCTcgtgtccccctgagacgagagatctctgcatttggggcctggaaaaaatcttccgatgacgtaaaatgacgatttttgcgtcgtcggaagatttttgggccagtggCAAGGACTACAGCCCATGCTACAGCCAGTattaggatctacttccgtatgttttcaacacgcccacagggggttggactgccgagtctggccgaggtattccgaatgaaaacgactgtcagccatcttgaaccttcgctaaacaggctttcggttttcagcagaaaacatttacaacaattatctgcattcaaactaccggacgtgtgtaccaccgggatacatcggtacagatcggagaatatgtagaaaacgttattacagacgcaatactcggcacactacgtgagcttcgcctgcacggagaccagcggtgtcgctcaatgccgctagccggctgaCATGAACTAACGTAACCGTCCATTCCTGCCCATCCAACTTttctgcttgcaagtgtctgctcattaaacaacaagctggactagatcctccttcaacgaaactcccaacgtgagttcagtgactgctgtgtttttgtttttgtggaaacatgcctgaacaacagtgtaccggcaccgggactatccagctaccaggctgctctcgccggcccgtggaggtgggcagtgttaaacggactggtgtagaaataaaatccaactagctactgctaactgctggtggagcttgtgactgttaaatgccgaccattcgacattccacgctaattcacggctgtgtttatactctgtgcttagctacaccaatgctagtatgctttagctgaactttacggatcctgcttgcaagtgtctgctcatttaggccacaaactggactacatccaacttcaacgacactcccaacgtgagttcagagactgctgtgtttttgttgttgtggaaacatgaccgttaaatgccgaccattctacattgcacgctaattcacggatgtgtttatgctcggtgtttacagcccaccaagcgctaatgctagtatgtgtcaGCTGAACTtcacggagcctataaagtgtgtgtactaaatgtagcccgtttcgtatgtcgtttttatatattgtcgtttttatattaaatgtgtaacaccacttgaatcacgatgaaacgttg
>XM_039798425.1
CGCAGCGATCAGACAGAAGTGAAATAACCAGCTGGAGTTTAATAATCTCATTATCCAACAGCAACATAATGAAGAGCTTTCTTCTACTCATCCTCTCACTGATGATAACAGGCTGGGAGGCCTCATCTGAAGTGAAGGGATGCACAGATGGATGGGTGGAATTCATCTGCCAGCATAACCCAACTCATCAATATCAAAGTGTTGATGTAGTTAAGAACAGCCAAACAATCATACGAAGTACTCGAAAGAATGAGTGGCAGACCGAGGGCAGATTTTCTGTTTACTATGATGCAGCAAATAGAAAGCTCAGAGTGGTCATCAAACCACATCAACATGGGGACTCTGGGAAGTACAAGTGTACATTTAAATTTGAAGGAAAATCTGAAAGTGATAAAGTGGACTTGAGAGTTGATAACGGCTGCCAGACACCATTTAATCAAACTGCGTACAGAACAGCTAAAACCACCATCTCATGTAACAAAAGAAACTCCACAGTCATGTTTTTCTGCAAAGAGAACGGTTCAATCTGTGAGGATATTTTATCAACAAAATCTTCTCTGAAGTCAAACGGGTCCTTCACTCTCACAGAGACCAGTAGTAGCTTCAACATGTCCATCAGTAATGTGTCCTCACAGCATGCTGGGGTCTACTGGTGTGGAGTGGAAACAGATAAAGGAAGTAACAGAGCTGCACTCAGAAAAATACAACTGGAGGTTAATGATACTATTACTAGCTTCACTAGGTCTCCAACTGTTGGACAGAATCTCACATACTGGTGTGGATATCCAAAGGGTACTCCGATAAAAAAATTCATCTGTAAAGGAGAAGATCCATCTATATGTAAACAGATAGTAAGCACGCAACAGAGTAACACTGGAAAGTATTTTATGATGGAGGACAAAGAAAGGATAAATAGCACCATAACAGTGAGAAACGTAACAACAGAAGACTCTGGGACATACTGGTGTGGAGCAGAAAGAAATGACCCGAAACAGAGCAACCTATTCTTCCACAAACTTGTGATGACTGTCGTGACTCGAACTACATCAAGTCCTGGGGCCTCCTCGTTACCTGGAACCATATCTGGGGTCGTCTGTGTGGCTGTGCTGCTGGTGCTGCTCATTTTGGTTCTCGTCTGGAAACGATTTCAGCGttcaaaagacacaaaaaatggAGAACAGAACAATGAGGATGGTGTCTATGAGGAGATACAGGAGCGCCCCCAGAAGCCAGACTCAGGAACTGCACTCAGCACTATTTATGTCACAGCCAACGCTCCCACAAACCCCTCTGCCTCGCAGCATTACTCCACGGTCAACTTTCCCAACAGCTATGGAGAAGCTAGTGGTGACACATATTCTACTGTGTGGGACAGCGGCCATAGTCCCACCCACTCTGCTGTCAATCATCCATCCAGACTTCCTGAAGACCCTTTCTATTCTACTGTCAACAACCCACAGCAGCACTGAGACCAGTCCTGACACTCTTCACTTCAGTTTTTTAATGGGACATTATTTGATCACACCAGGCTTCAGAATTCAGGATTCATGACATTGTTCACTTTGTTTGATTCAAGGTTTAGTCACAGGGCTTCACTGATATACACAAAGTTACCAGCCCTCTAACCAGCACTACAGTTCAATACAACATGTCCAACTACCACCTCAATAAGGACCACACAACTCAATCAACACCTCTGATCTATATTCATTAATAATAAGAAGAGTTAATCCAGGACAGTTGGATTAACAAGAAAGTCATCACAAATGGTACCACTtcttaacctgactccgccagatagattgcttcgcatttgctcggcatatccatctgggaactttcc
>XM_039798426.1
CGCAGCGATCAGACAGAAGTGAAATAACCAGCTGGAGTTTAATAATCTCATTATCCAACAGCAACATAATGAAGAGCTTTCTTCTACTCATCCTCTCACTGATGATAACAGGCTGGGAGGCCTCATCTGAAGTGAAGGGATGCACAGATGGATGGGTGGAATTCATCTGCCAGCATAACCCAACTCATCAATATCAAAGTGTTGATGTAGTTAAGAACAGCCAAACAATCATACGAAGTACTCGAAAGAATGAGTGGCAGACCGAGGGCAGATTTTCTGTTTACTATGATGCAGCAAATAGAAAGCTCAGAGTGGTCATCAAACCACATCAACATGGGGACTCTGGGAAGTACAAGTGTACATTTAAATTTGAAGGAAAATCTGAAAGTGATAAAGTGGACTTGAGAGTTGATAACGGCTGCCAGACACCATTTAATCAAACTGCGTACAGAACAGCTAAAACCACCATCTCATGTAACAAAAGAAACTCCACAGTCATGTTTTTCTGCAAAGAGAACGGTTCAATCTGTGAGGATATTTTATCAACAAAATCTTCTCTGAAGTCAAACGGGTCCTTCACTCTCACAGAGACCAGTAGTAGCTTCAACATGTCCATCAGTAATGTGTCCTCACAGCATGCTGGGGTCTACTGGTGTGGAGTGGAAACAGATAAAGGAAGTAACAGAGCTGCACTCAGAAAAATACAACTGGAGGTTAATGATACTATTACTAGCTTCACTAGGTCTCCAACTGTTGGACAGAATCTCACATACTGGTGTGGATATCCAAAGGGTACTCCGATAAAAAAATTCATCTGTAAAGGAGAAGATCCATCTATATGTAAACAGATAGTAAGCACGCAACAGAGTAACACTGGAAAGTATTTTATGATGGAGGACAAAGAAAGGATAAATAGCACCATAACAGTGAGAAACGTAACAACAGAAGACTCTGGGACATACTGGTGTGGAGCAGAAAGAAATGACCCGAAACAGAGCAACCTATTCTTCCACAAACTTGTGATGACTGTCGGGGCCTCCTCGTTACCTGGAACCATATCTGGGGTCGTCTGTGTGGCTGTGCTGCTGGTGCTGCTCATTTTGGTTCTCGTCTGGAAACGATTTCAGCGttcaaaagacacaaaaaatggAGAACAGAACAATGAGGATGGTGTCTATGAGGAGATACAGGAGCGCCCCCAGAAGCCAGACTCAGGAACTGCACTCAGCACTATTTATGTCACAGCCAACGCTCCCACAAACCCCTCTGCCTCGCAGCATTACTCCACGGTCAACTTTCCCAACAGCTATGGAGAAGCTAGTGGTGACACATATTCTACTGTGTGGGACAGCGGCCATAGTCCCACCCACTCTGCTGTCAATCATCCATCCAGACTTCCTGAAGACCCTTTCTATTCTACTGTCAACAACCCACAGCAGCACTGAGACCAGTCCTGACACTCTTCACTTCAGTTTTTTAATGGGACATTATTTGATCACACCAGGCTTCAGAATTCAGGATTCATGACATTGTTCACTTTGTTTGATTCAAGGTTTAGTCACAGGGCTTCACTGATATACACAAAGTTACCAGCCCTCTAACCAGCACTACAGTTCAATACAACATGTCCAACTACCACCTCAATAAGGACCACACAACTCAATCAACACCTCTGATCTATATTCATTAATAATAAGAAGAGTTAATCCAGGACAGTTGGATTAACAAGAAAGTCATCACAAATGGTACCACTtcttaacctgactccgccagatagattgcttcgcatttgctcggcatatccatctgggaactttcc
>XR_005639021.1
TTCAGGAAACCTGCAGAGATGCAGTGATCAGACAGAAGTGAAATAATCCGCTGGATTTTAATAATCTGACGGAGGATCTCAGCATCCAACAGCAACATCATGAAGAGCTTTCATCTACTCATCCTCTCACTGATGATAACAGGGGCCTCCTCGTTACCTGTAACCATATCTGTGGTCGTCTGTGTGGCTGTGCTGCTGGTGCTGCTCATTATGGTTCTCGTCTGGAAACGATGGTGCCTATGAGGAGATACAGGAGCGCCCCCAGAATCCGGACTCAGGAACTGCAATCAACACTATTTATCTCACAG

Function

GO: NA

KEGG:

id description
ko00410 beta-Alanine metabolism
ko00770 Pantothenate and CoA biosynthesis
ko04141 Protein processing in endoplasmic reticulum

RNA

RNA id representative length rna type GC content exon number start site end site
TU58177 True 3036 TUCP 0.46 4 33188068 33192173
XM_039798425.1 False 1843 mRNA 0.43 8 33210634 33223258
XM_039798426.1 False 1819 mRNA 0.43 7 33210634 33223258
XR_005639021.1 False 308 transcript 0.48 3 33190754 33192178

Neighbor

gene id symbol gene type direction distance location
LOC120557798 NA coding downstream 3048 33179668 ~ 33185020 (-)
LOC120557799 NA coding downstream 10736 33167170 ~ 33177332 (-)
LOC120557797 NA coding downstream 34229 33106047 ~ 33153839 (-)
LOC120557795 NA coding downstream 88887 33090519 ~ 33099181 (-)
LOC120557090 NA coding downstream 114870 33069149 ~ 33073198 (-)
LOC120557804 NA coding upstream 14786 33238044 ~ 33241472 (-)
LOC120557841 LOC101068541,LOC105888650,LOC105896821,LOC106933405,LOC105891059,LOC106527799 coding upstream 127389 33350647 ~ 33351072 (-)
LOC120557091 NA coding upstream 175016 33398274 ~ 33404147 (-)
LOC120557829 LOC105888650,LOC105896821,LOC101068541,LOC106527799,LOC105891059 coding upstream 213229 33436487 ~ 33438800 (-)
LOC120557824 NA coding upstream 215634 33438892 ~ 33440415 (-)
LOC120557801 NA non-coding downstream 123042 33060421 ~ 33065026 (-)
G43241 LOC104958239,LOC105940397,LOC103464819,LOC108244949,LOC103150142 non-coding downstream 145946 33022345 ~ 33042122 (-)
G43173 NA non-coding downstream 315971 32871842 ~ 32872097 (-)
G43163 NA non-coding downstream 340966 32845424 ~ 32847102 (-)
G43161 NA non-coding downstream 345559 32839751 ~ 32842509 (-)
G43329 NA non-coding upstream 112233 33335491 ~ 33336768 (-)
G43331 NA non-coding upstream 114099 33337357 ~ 33338295 (-)
G43334 NA non-coding upstream 117124 33340382 ~ 33345803 (-)
G43401 LOC105888650,LOC101068541,LOC105896821,LOC106933405,LOC105891059,LOC106527799 non-coding upstream 293640 33516898 ~ 33517368 (-)
G43402 NA non-coding upstream 295519 33518777 ~ 33519136 (-)
podxl2 podxl2,LOC102777608 other downstream 404232 32750792 ~ 32783836 (-)
LOC120557401 blcap other downstream 440958 32688020 ~ 32747110 (-)
LOC120557755 grip2,LOC103357845,LOC102782189 other downstream 2172421 30946332 ~ 31015647 (-)
LOC120558045 NA other downstream 2508986 30638971 ~ 30679082 (-)
romo1 romo1,LOC102788570 other downstream 3057751 30125751 ~ 30130317 (-)
LOC120557840 svbp other upstream 303239 33526497 ~ 33530867 (-)
LOC120557811 fam120a other upstream 688122 33911380 ~ 33953932 (-)
setd5 setd5 other upstream 1635564 34858822 ~ 34925111 (-)
slc2a10 slc2a10 other upstream 2228747 35452005 ~ 35464535 (-)
si:ch73-267c23.10 LOC104930309,LOC102192274,LOC101472365,LOC100702990,LOC106959684,LOC103152714,LOC103465506,LOC104941013 other upstream 2267566 35490824 ~ 35510748 (-)

Expression


Co-expression Network