LOC120557401 (blcap)


Basic Information

Item Value
gene id LOC120557401
gene name blcap
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 32688020 ~ 32747110 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU57953
CTAAAGAAGAAGACGAAAGAATCCGCTACGTACGCAGTCAGTTGTTGAAACAGAAATGGTGTGGATGGTTGTTTCCTGCTGAGAATGAACCCACAATATGTCAGGGCTGACCTGATGACCGCAACGTCTGGCGACTTTGACGTGTTCCTCCACCGTCCCAGCTCTGTTGGGTAGGGCGGCTCTCCCTCTTACGGTCTGCTaaggtcttttttttatttttattttttttcacccaaCAACCTGGGATTGATCTGTACCAGCCCTACAGAGACCCTCTGCCAACACGccgcattaaaaaaaaaaaaaaaaaaaaggaacaatgtATTGCCTACAGTGGCTACTTCCGGTGTTGCTCATCCCCAAGCCGCTGAACCCGGCGCTGTGGTTCAACCACTCCATGTTTATGGGCTTCTACCTGCTCAGCTTCTTGCTGGAGAGGAAGCCCTGCACCATCTGTGCCTTGGTCTTCCTGGCCGCCCTCTTCCTCATCTGCTACAGCTGCTGGGGCAACTGCTTCCTCTACCACTGCCAGGACGCCACGCTTCCAGACGCTGCCCACGACCCGGCTATTATCGGGACc
>TU57956
ACTAAAGAGGGGATAGGCTACACTTTGGGGGGTGGGACGGTGTAGAGGTGGTGATGAACGACTGTTGGGGGTGGATACCGCAAATACAGAGAGCGCTCTGCCAAAAGTGTTTATTGAAGAGAAGAGCCAGTTCTGAAAGGATTGTGGGAGGCTGCTTTGCCATGCTGTAAGACAGACAGACTTGAATTTGAGGTGGTAGGAGGGGAGGAAGAGATGTCGGAGAAGACGGGGGGGGGGCACTTGAAATGCCAAGGAAAGGAAAATTTCACCTTCTGcaacttttgtatttttattttttatttttcagcatTTGAATGAAAATTAGACCATATATCCACCACGTGTGACATCTACCTAGAGGGACCACGGTTTTTCAGTATTCTGGTTTCTTTCTAGCGCTCTGGCTTGGTAACGTCAAACGTTGGACGTCACTTTCTCCAAAAACCTGCTAAATCATCTTTTCAGAGTGAAAGCACCCTCCACCTCAAACTGCCAAAAGTAACGCAATCCTGCTGAAAGCTCCAGACCAAGTTGGATGTTCCCAAGATTCACTGGCAGCCATGCTTGCTTCTCCGTCCCATACTGTGGCGGTCGTTGACAAGCTTTATACGCCAGGTAGTGTTAAGAGTTAACTTGGCATCTTGACATGTTTTCTCTCCCCTAAGGTCTAGAGAAAAGAGGGCCGACATGTCATTTACAGTCCAACCTGACCAAACTCTGTTGCCACTTTGGCTCTGCACACGTAACGCTGTCCTCCACAAGGAGAGCACACAGACACTGGACAATCGATAACTATGCTGTGAATAACTTTCTTTGCCGCATCTCCACACAAACTCATATCAGAAGGTGTAATGATGCTGAGAAACTGTTCCGTTGTTATTACCCACAGTGCTCTGCAGCTACCCCTCTCTTTGTCTTCctagctcctcttcctcctcctcacctcaaaataaatttattttgtttttcttgtgcaTGGGTTGCtgttattttacacacacacacacacacacacacacacactttaattaattaaaacaaaatgctgaaagTTTCCAAAGAGTAAATACatttggatgtgtgtgtctgttggtgAATGGAAGAAAATGTGTTATGTGCGACAGGtgtgtatattttgtgtttgtgtgattaaGACATGTTGATTTGCATAGAAGTGACAATATACAAGGTTACAGAACAGTAGATGGTCAGTTTTTTTTAGTATGAATAAGCAATACGGTGCTGGTTAAGAAAAACGTATTGAATTCTGACAAAAACTGACTAGTTTATTGGTAATCAAAAGGGCAATACTGTCATAATGTTTCCTTGTGTATCACTGCTGTAAGTGTTATGTTTAgctgccaggtgtgtgtgtgtgtgtgtgtgtgtgtgtcctgttacAGTACTGGCCATCCTCACTGCTACGTTCTTGCTTtggttttaatttaaataaagtttttccTCTCAAC
>TU57957
ACTAAAGAGGGGATAGGCTACACTTTGGGGGGTGGGACGGTGTAGAGGTGGTGATGAACGACTGTTGGGGGTGGATACCGCAAATACAGAGAGCGCTCTGCCAAAAGTGTTTATTGAAGAGAAGAGCCAGTTCTGAAAGGATTGTGGGAGGCTGCTTTGCCATGCTGTAAGACAGACAGACTTGAATTTGAGGTGGTAGGAGGGGAGGAAGAGATGTCGGAGAAGACGGGGGGGGGGCACTTGAAATGCCAAGGAAAGGAAAATTTCACCTTCTGcaacttttgtatttttattttttatttttcagcatTTGAATGAAAATTAGACCATATATCCACCACGTGTGACATCTACCTAGAGGGACCACGGTTTTTCAGTATTCTGGTTTCTTTCTAGCGCTCTGGCTTGGTAACGTCAAACGTTGGACGTCACTTTCTCCAAAAACCTGCTAAATCATCTTTTCAGAGTGAAAGCACCCTCCACCTCAAACTGCCAAAAGTAACGCAATCCTGCTGAAAGCTCCAGACCAAGTTGGATGTTCCCAAGATTCACTGGCAGCCATGCTTGCTTCTCCGTCCCATACTGTGGCGGTCGTTGACAAGCTTTATACGCCAGGTAGTGTTAAGAGTTAACTTGGCATCTTGACATGTTTTCTCTCCCCTAAGGTCTAGAGAAAAGAGGGCCGACATGTCATTTACAGTCCAACCTGACCAAACTCTGTTGCCACTTTGGCTCTGCACACGTAACGCTGTCCTCCACAAGGAGAGCACACAGACACTGGACAATCGATAACTATGCTGTGAATAACTTTCTTTGCCGCATCTCCACACAAACTCATATCAGAAGGTGTAATGATGCTGAGAAACTGTTCCGTTGTTATTACCCACAGTGCTCTGCAGCTACCCCTCTCTTTGTCTTCctagctcctcttcctcctcctcacctcaaaataaatttattttgtttttcttgtgcaTGGGTTGCtgttattttatacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacat
>TU57958
ACTAAAGAGGGGATAGGCTACACTTTGGGGGGTGGGACGGTGTAGAGGTGGTGATGAACGACTGTTGGGGGTGGATACCGCAAATACAGAGAGCGCTCTGCCAAAAGTGTTTATTGAAGAGAAGAGCCAGTTCTGAAAGGATTGTGGGAGGCTGCTTTGCCATGCTGTAAGACAGACAGACTTGAATTTGAGGTGGTAGGAGGGGAGGAAGAGATGTCGGAGAAGACGGGGGGGGGGCACTTGAAATGCCAAGGAAAGGAAAATTTCACCTTCTGcaacttttgtatttttattttttatttttcagcatTTGAATGAAAATTAGACCATATATCCACCACGTGTGACATCTACCTAGAGGGACCACGGTTTTTCAGTATTCTGGTTTCTTTCTAGCGCTCTGGCTTGGTAACGTCAAACGTTGGACGTCACTTTCTCCAAAAACCTGCTAAATCATCTTTTCAGAGTGAAAGCACCCTCCACCTCAAACTGCCAAAAGTAACGCAATCCTGCTGAAAGCTCCAGACCAAGTTGGATGTTCCCAAGATTCACTGGCAGCCATGCTTGCTTCTCCGTCCCATACTGTGGCGGTCGTTGACAAGCTTTATACGCCAGGTAGTGTTAAGAGTTAACTTGGCATCTTGACATGTTTTCTCTCCCCTAAGGTCTAGAGAAAAGAGGGCCGACATGTCATTTACAGTCCAACCTGACCAAACTCTGTTGCCACTTTGGCTCTGCACACGTAACGCTGTCCTCCACAAGGAGAGCACACAGACACTGGACAATCGATAACTATGCTGTGAATAACTTTCTTTGCCGCATCTCCACACAAACTCATATCAGAAGGTGTAATGATGCTGAGAAACTGTTCCGTTGTTATTACCCACAGTGCTCTGCAGCTACCCCTCTCTTTGTCTTCctagctcctcttcctcctcctcacctcaaaataaatttattttgtttttcttgtgcaTGGGTTGCtgttattttacacacacacacacacacacacacacacactttaattaattaaaacaaaatgctgaaagTTTCCAAAGAGTAAATACatttggatgtgtgtgtctgttggtgAATGGAAGAAAATGTGTTATGTGCGACAGGtgtgtatattttgtgtttgtgtgattaaGACATGTTGATTTGCATAGAAGTGACAATATACAAGGTTACAGAACAGTAGATGGTCAGTTTTTTTTAGTATGAATAAGCAATACGGTGCTGGTTAAGAAAAACGTATTGAATTCTGACAAAAACTGACTAGTTTATTGGTAATCAAAAGGGCAATACTGTCATAATGTTTCCTTGTGTATCACTGCTGTAAGTGTTATGTTTAgctgccaggtgtgtgtgtgtgtgtgtgtgtgtgtcctgttacAGTACTGGCCATCCTCACTGCTACGTTCTTGCTTtggttttaatttaaataaagtttttccTCTCAAC
>TU57959
ACTAAAGAGGGGATAGGCTACACTTTGGGGGGTGGGACGGTGTAGAGGTGGTGATGAACGACTGTTGGGGGTGGATACCGCAAATACAGAGAGCGCTCTGCCAAAAGTGTTTATTGAAGAGAAGAGCCAGTTCTGAAAGGATTGTGGGAGGCTGCTTTGCCATGCTGTAAGACAGACAGACTTGAATTTGAGGTGGTAGGAGGGGAGGAAGAGATGTCGGAGAAGACGGGGGGGGGGCACTTGAAATGCCAAGGAAAGGAAAATTTCACCTTCTGcaacttttgtatttttattttttatttttcagcatTTGAATGAAAATTAGACCATATATCCACCACGTGTGACATCTACCTAGAGGGACCACGGTTTTTCAGTATTCTGGTTTCTTTCTAGCGCTCTGGCTTGGTAACGTCAAACGTTGGACGTCACTTTCTCCAAAAACCTGCTAAATCATCTTTTCAGAGTGAAAGCACCCTCCACCTCAAACTGCCAAAAGTAACGCAATCCTGCTGAAAGCTCCAGACCAAGTTGGATGTTCCCAAGATTCACTGGCAGCCATGCTTGCTTCTCCGTCCCATACTGTGGCGGTCGTTGACAAGCTTTATACGCCAGGTAGTGTTAAGAGTTAACTTGGCATCTTGACATGTTTTCTCTCCCCTAAGGTCTAGAGAAAAGAGGGCCGACATGTCATTTACAGTCCAACCTGACCAAACTCTGTTGCCACTTTGGCTCTGCACACGTAACGCTGTCCTCCACAAGGAGAGCACACAGACACTGGACAATCGATAACTATGCTGTGAATAACTTTCTTTGCCGCATCTCCACACAAACTCATATCAGAAGGTGTAATGATGCTGAGAAACTGTTCCGTTGTTATTACCCACAGTGCTCTGCAGCTACCCCTCTCTTTGTCTTCctagctcctcttcctcctcctcacctcaaaataaatttattttgtttttcttgtgcaTGGGTTGCtgttattttacacacacacacacacacacacacacacactttaattaattaaaacaaaatgctgaaagTTTCCAAAGAGTAAATACatttggatgtgtgtgtctgttggtgAATGGAAGAAAATGTGTTATGTGCGACAGGtgtgtatattttgtgtttgtgtgattaaGACATGTTGATTTGCATAGAAGTGACAATATACAAGGTTACAGAACAGTAGATGGTCAGTTTTTTTTAGTATGAATAAGCAATACGGTGCTGGTTAAGAAAAACGTATTGAATTCTGACAAAAACTGACTAGTTTATTGGTAATCAAAAGGGCAATACTGTCATAATGTTTCCTTGTGTATCACTGCTGTAAGTGTTATGTTTAgctgccaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcctgttacAGTACTGGCCATCCTCACTGCTACGTTCTTGCTTtggttttaatttaaataaagtttttccTCTCAAC
>XM_039797689.1
GTAGGCTACAtgctaaaaatattttttatttatgtattagtGTTGGTTGTACACTGTCACGCTTCTATACAGTAGGTGGCGGCATGCACCTTAAACGTTGGTTTGTAGTCCGATAATAAAGCTAAAGAAGAAGACGAAAGAATCCGCTACGTACGCAGTCAGTTGTTGAAACAGAAATGGTGTGGATGGTTGTTTCCTGCTGAGAATGAACCCACAATATGTCAGGGCTGACCTGATGACCGCAACGTCTGGCGACTTTGACGTGTTCCTCCACCGTCCCAGCTCTGTTGGGTAGGGCGGCTCTCCCTCTTACGGTCTGCTaaggtcttttttttatttttattttttttcacccaaCAACCTGGGATTGATCTGTACCAGCCCTACAGAGACCCTCTGCCAACACGccgcattaaaaaaaaaaaaaaaaaaaaggaacaatgtATTGCCTACAGTGGCTACTTCCGGTGTTGCTCATCCCCAAGCCGCTGAACCCGGCGCTGTGGTTCAACCACTCCATGTTTATGGGCTTCTACCTGCTCAGCTTCTTGCTGGAGAGGAAGCCCTGCACCATCTGTGCCTTGGTCTTCCTGGCCGCCCTCTTCCTCATCTGCTACAGCTGCTGGGGCAACTGCTTCCTCTACCACTGCCAGGACGCCACGCTTCCAGACGCTGCCCACGACCCGGCTATTATCGGGACctaggacagaaaaaaaagggggggggattCGATATCTGGAAGGGGGAATTTAGGGGAGGGGGGTGCAAAGGGTGATGAGGCATTGCTGGAGAATGATACTGCCATACTAAAGAGGGGATAGGCTACACTTTGGGGGGTGGGACGGTGTAGAGGTGGTGATGAACGACTGTTGGGGGTGGATACCGCAAATACAGAGAGCGCTCTGCCAAAAGTGTTTATTGAAGAGAAGAGCCAGTTCTGAAAGGATTGTGGGAGGCTGCTTTGCCATGCTGTAAGACAGACAGACTTGAATTTGAGGTGGTAGGAGGGGAGGAAGAGATGTCGGAGAAGACGGGGGGGGGGCACTTGAAATGCCAAGGAAAGGAAAATTTCACCTTCTGcaacttttgtatttttattttttatttttcagcatTTGAATGAAAATTAGACCATATATCCACCACGTGTGACATCTACCTAGAGGGACCACGGTTTTTCAGTATTCTGGTTTCTTTCTAGCGCTCTGGCTTGGTAACGTCAAACGTTGGACGTCACTTTCTCCAAAAACCTGCTAAATCATCTTTTCAGAGTGAAAGCACCCTCCACCTCAAACTGCCAAAAGTAACGCAATCCTGCTGAAAGCTCCAGACCAAGTTGGATGTTCCCAAGATTCACTGGCAGCCATGCTTGCTTCTCCGTCCCATACTGTGGCGGTCGTTGACAAGCTTTATACGCCAGGTAGTGTTAAGAGTTAACTTGGCATCTTGACATGTTTTCTCTCCCCTAAGGTCTAGAGAAAAGAGGGCCGACATGTCATTTACAGTCCAACCTGACCAAACTCTGTTGCCACTTTGGCTCTGCACACGTAACGCTGTCCTCCACAAGGAGAGCACACAGACACTGGACAATCGATAACTATGCTGTGAATAACTTTCTTTGCCGCATCTCCACACAAACTCATATCAGAAGGTGTAATGATGCTGAGAAACTGTTCCGTTGTTATTACCCACAGTGCTCTGCAGCTACCCCTCTCTTTGTCTTCctagctcctcttcctcctcctcacctcaaaataaatttattttgtttttcttgtgcaTGGGTTGCtgttattttacacacacacacacacacacacacacacactttaattaattaaaacaaaatgctgaaagTTTCCAAAGAGTAAATACatttggatgtgtgtgtctgttggtgAATGGAAGAAAATGTGTTATGTGCGACAGGtgtgtatattttgtgtttgtgtgattaaGACATGTTGATTTGCATAGAAGTGACAATATACAAGGTTACAGAACAGTAGATGGTCAGTTTTTTTTAGTATGAATAAGCAATACGGTGCTGGTTAAGAAAAACGTATTGAATTCTGACAAAAACTGACTAGTTTATTGGTAATCAAAAGGGCAATACTGTCATAATGTTTCCTTGTGTATCACTGCTGTAAGTGTTATGTTTAgctgccaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcctgttacAGTACTGGCCATCCTCACTGCTACGTTCTTGCTTtggttttaatttaaataaagtttttccTCTCAACATTAAA

Function

symbol description
blcap Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in myotome. Orthologous to human BLCAP (BLCAP apoptosis inducing factor).

NR:

description
PREDICTED: bladder cancer-associated protein

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU57953 False 580 TUCP 0.52 2 32743879 32746989
TU57956 False 1469 lncRNA 0.43 2 32742188 32743774
TU57957 False 1095 lncRNA 0.46 3 32688020 32743774
TU57958 False 1467 lncRNA 0.43 2 32742188 32743774
TU57959 False 1479 lncRNA 0.43 2 32742188 32743774
XM_039797689.1 True 2398 mRNA 0.45 2 32742182 32747110

Neighbor

gene id symbol gene type direction distance location
chd6 chd6,LOC102778367,LOC102308233,LOC101486676,LOC102201960 coding downstream 64495 32456267 ~ 32623525 (-)
ptprt NA coding downstream 420811 31814418 ~ 32267209 (-)
LOC120556662 samd3,LOC101476819 coding downstream 1116239 31560616 ~ 31571781 (-)
LOC120557088 LOC107748254 coding downstream 1219848 31451411 ~ 31468172 (-)
LOC120558255 NA coding downstream 1287888 31400076 ~ 31400132 (-)
mcm2 mcm2 coding upstream 37667 32784777 ~ 32800719 (-)
pigu pigu coding upstream 57052 32804162 ~ 32818975 (-)
tmem74b tmem74b,LOC102310340 coding upstream 100419 32847529 ~ 32859255 (-)
LOC120557780 rbl1 coding upstream 126006 32873116 ~ 32889435 (-)
LOC120557781 rbl1,LOC103375195 coding upstream 143203 32890313 ~ 32896880 (-)
G43060 NA non-coding downstream 231436 32441160 ~ 32456584 (-)
LOC120556794 NA non-coding downstream 231777 32410242 ~ 32456243 (-)
G43036 NA non-coding downstream 367536 32320269 ~ 32320484 (-)
G43035 NA non-coding downstream 406830 32280285 ~ 32281190 (-)
LOC120557533 NA non-coding downstream 541310 32145593 ~ 32146710 (-)
G43165 NA non-coding upstream 55328 32802438 ~ 32803328 (-)
G43167 psmf1 non-coding upstream 72889 32819999 ~ 32831318 (-)
G43168 NA non-coding upstream 89676 32836786 ~ 32836986 (-)
G43161 NA non-coding upstream 92641 32839751 ~ 32842509 (-)
G43163 NA non-coding upstream 98314 32845424 ~ 32847102 (-)
LOC120557755 grip2,LOC103357845,LOC102782189 other downstream 1672373 30946332 ~ 31015647 (-)
LOC120558045 NA other downstream 2008938 30638971 ~ 30679082 (-)
romo1 romo1,LOC102788570 other downstream 2557703 30125751 ~ 30130317 (-)
LOC120556842 rpp14,LOC102775666,LOC101465350,LOC103374991 other downstream 2650699 30036382 ~ 30037321 (-)
LOC120557442 hes5,LOC104956007 other downstream 3937787 28741798 ~ 28750233 (-)
podxl2 podxl2,LOC102777608 other upstream 3682 32750792 ~ 32783836 (-)
LOC120557803 NA other upstream 440958 33188068 ~ 33223258 (-)
LOC120557840 svbp other upstream 779387 33526497 ~ 33530867 (-)
LOC120557811 fam120a other upstream 1164270 33911380 ~ 33953932 (-)
setd5 setd5 other upstream 2111712 34858822 ~ 34925111 (-)

Expression


Co-expression Network