Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC120557533 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053115.1 |
| NCBI id | CM020912.1 |
| chromosome length | 44863486 |
| location | 32145593 ~ 32146710 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| id | description |
|---|---|
| ko05225 | Hepatocellular carcinoma |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU57814 | False | 215 | lncRNA | 0.49 | 3 | 32145600 | 32146696 |
| XR_005638979.1 | True | 236 | lncRNA | 0.50 | 3 | 32145593 | 32146710 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC120556662 | samd3,LOC101476819 | coding | downstream | 573812 | 31560616 ~ 31571781 (-) |
| LOC120557088 | LOC107748254 | coding | downstream | 677421 | 31451411 ~ 31468172 (-) |
| LOC120558255 | NA | coding | downstream | 745461 | 31400076 ~ 31400132 (-) |
| LOC120558244 | NA | coding | downstream | 747341 | 31398196 ~ 31398252 (-) |
| LOC120558242 | NA | coding | downstream | 749275 | 31396262 ~ 31396318 (-) |
| chd6 | chd6,LOC102778367,LOC102308233,LOC101486676,LOC102201960 | coding | upstream | 309557 | 32456267 ~ 32623525 (-) |
| mcm2 | mcm2 | coding | upstream | 638067 | 32784777 ~ 32800719 (-) |
| pigu | pigu | coding | upstream | 657452 | 32804162 ~ 32818975 (-) |
| tmem74b | tmem74b,LOC102310340 | coding | upstream | 700819 | 32847529 ~ 32859255 (-) |
| LOC120557780 | rbl1 | coding | upstream | 726406 | 32873116 ~ 32889435 (-) |
| G43030 | NA | non-coding | downstream | 6908 | 32117889 ~ 32138685 (-) |
| G43017 | NA | non-coding | downstream | 177438 | 31809521 ~ 31968155 (-) |
| G43018 | NA | non-coding | downstream | 384160 | 31698779 ~ 31761433 (-) |
| LOC120556863 | NA | non-coding | downstream | 400169 | 31742142 ~ 31745424 (-) |
| G42976 | NA | non-coding | downstream | 588599 | 31556787 ~ 31556994 (-) |
| G43035 | NA | non-coding | upstream | 133575 | 32280285 ~ 32281190 (-) |
| G43036 | NA | non-coding | upstream | 173559 | 32320269 ~ 32320484 (-) |
| LOC120556794 | NA | non-coding | upstream | 263532 | 32410242 ~ 32456243 (-) |
| G43060 | NA | non-coding | upstream | 294450 | 32441160 ~ 32456584 (-) |
| LOC120557381 | NA | non-coding | upstream | 574369 | 32721079 ~ 32740078 (-) |
| LOC120557755 | grip2,LOC103357845,LOC102782189 | other | downstream | 1129946 | 30946332 ~ 31015647 (-) |
| LOC120558045 | NA | other | downstream | 1466511 | 30638971 ~ 30679082 (-) |
| romo1 | romo1,LOC102788570 | other | downstream | 2015276 | 30125751 ~ 30130317 (-) |
| LOC120556842 | rpp14,LOC102775666,LOC101465350,LOC103374991 | other | downstream | 2108272 | 30036382 ~ 30037321 (-) |
| LOC120557442 | hes5,LOC104956007 | other | downstream | 3395360 | 28741798 ~ 28750233 (-) |
| LOC120557401 | blcap | other | upstream | 541310 | 32688020 ~ 32747110 (-) |
| podxl2 | podxl2,LOC102777608 | other | upstream | 604082 | 32750792 ~ 32783836 (-) |
| LOC120557803 | NA | other | upstream | 1041358 | 33188068 ~ 33223258 (-) |
| LOC120557840 | svbp | other | upstream | 1379787 | 33526497 ~ 33530867 (-) |
| LOC120557811 | fam120a | other | upstream | 1764670 | 33911380 ~ 33953932 (-) |
