G43402


Basic Information

Item Value
gene id G43402
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 33518777 ~ 33519136 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU58277
TTTTAAGCCCAAATTAGGCCCCGCGGATTTATAGAGGAGGCTCTTCTCTCTGTGCGAGGGAGCCAGAAAGTGCAGGTTGAAAACTGTCTTTGGTTTGAACGACGATGAAGTGAAGGAGATGTGAGCGAGCAGGAACAGGGAAGGTAGAAAAGCCGATGTGCATCCTGTCTGTGAAGAGTTTTCTCTCTGAGACAAAGCTGAGATAGGCATATGATGTGTGTAAAACTATAAAACTCACTTGTACCTGGCTCCGTTCCAAAGTAATATGAGCAACCAAACAGAAATAATTAAGACACTGCAACATGAATTGCGTTCCACTCTGTTTACTTGTAAACATGtaattgtttaaataaatcTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58277 True 360 lncRNA 0.42 1 33518777 33519136

Neighbor

gene id symbol gene type direction distance location
LOC120557834 si:ch1073-153i20.5,si:dkey-261m9.15,LOC103462478,LOC103381127,LOC103379246,LOC101485372,LOC102204254 coding downstream 2252 33516109 ~ 33516525 (-)
LOC120557838 LOC104935308,LOC104932967 coding downstream 4374 33514019 ~ 33514403 (-)
LOC120557844 LOC106958509,LOC107690788,LOC107671222,LOC107569590,LOC107579420 coding downstream 6229 33512205 ~ 33512548 (-)
LOC120557837 LOC104935308,LOC104932967 coding downstream 8764 33509470 ~ 33510013 (-)
LOC120557836 LOC104932967,LOC104935308 coding downstream 76590 33441584 ~ 33442187 (-)
wnt7aa LOC104929678,LOC102793873 coding upstream 132565 33651701 ~ 33666301 (-)
ptpdc1a ptpdc1,LOC103367803,LOC102794169 coding upstream 158471 33677607 ~ 33745021 (-)
phf2 NA coding upstream 350267 33869403 ~ 33908993 (-)
cass4 cass4 coding upstream 455300 33974436 ~ 33992918 (-)
cstf1 cstf1 coding upstream 474587 33993723 ~ 34013694 (-)
G43401 LOC105888650,LOC101068541,LOC105896821,LOC106933405,LOC105891059,LOC106527799 non-coding downstream 1409 33516898 ~ 33517368 (-)
G43334 NA non-coding downstream 172974 33340382 ~ 33345803 (-)
G43331 NA non-coding downstream 180482 33337357 ~ 33338295 (-)
G43329 NA non-coding downstream 182009 33335491 ~ 33336768 (-)
LOC120557801 NA non-coding downstream 453751 33060421 ~ 33065026 (-)
G43405 NA non-coding upstream 4448 33523584 ~ 33523950 (-)
G43410 NA non-coding upstream 34242 33553378 ~ 33555188 (-)
G43414 NA non-coding upstream 49562 33568698 ~ 33568916 (-)
G43423 NA non-coding upstream 135713 33654849 ~ 33655678 (-)
G43481 NA non-coding upstream 346855 33865991 ~ 33866441 (-)
LOC120557803 NA other downstream 295519 33188068 ~ 33223258 (-)
podxl2 podxl2,LOC102777608 other downstream 734941 32750792 ~ 32783836 (-)
LOC120557401 blcap other downstream 771667 32688020 ~ 32747110 (-)
LOC120557755 grip2,LOC103357845,LOC102782189 other downstream 2503130 30946332 ~ 31015647 (-)
LOC120558045 NA other downstream 2839695 30638971 ~ 30679082 (-)
LOC120557840 svbp other upstream 7361 33526497 ~ 33530867 (-)
LOC120557811 fam120a other upstream 392244 33911380 ~ 33953932 (-)
setd5 setd5 other upstream 1339686 34858822 ~ 34925111 (-)
slc2a10 slc2a10 other upstream 1932869 35452005 ~ 35464535 (-)
si:ch73-267c23.10 LOC104930309,LOC102192274,LOC101472365,LOC100702990,LOC106959684,LOC103152714,LOC103465506,LOC104941013 other upstream 1971688 35490824 ~ 35510748 (-)

Expression


Co-expression Network