G43423


Basic Information

Item Value
gene id G43423
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 33654849 ~ 33655678 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU58300
cgagagactgacatttttgcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcgtttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttgtgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttcagggtgatgagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcaattttggtttcatctgaccacagcaccttcttccacatgtttggtgtgtctcccaggtggcttttggcaaactttaaacgacactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcagtatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctcattgtatgagctgaaagtttagagggacggccgggtcttcgtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58300 True 830 lncRNA 0.45 1 33654849 33655678

Neighbor

gene id symbol gene type direction distance location
LOC120557834 si:ch1073-153i20.5,si:dkey-261m9.15,LOC103462478,LOC103381127,LOC103379246,LOC101485372,LOC102204254 coding downstream 138324 33516109 ~ 33516525 (-)
LOC120557838 LOC104935308,LOC104932967 coding downstream 140446 33514019 ~ 33514403 (-)
LOC120557844 LOC106958509,LOC107690788,LOC107671222,LOC107569590,LOC107579420 coding downstream 142301 33512205 ~ 33512548 (-)
LOC120557837 LOC104935308,LOC104932967 coding downstream 144836 33509470 ~ 33510013 (-)
LOC120557836 LOC104932967,LOC104935308 coding downstream 212662 33441584 ~ 33442187 (-)
ptpdc1a ptpdc1,LOC103367803,LOC102794169 coding upstream 21929 33677607 ~ 33745021 (-)
phf2 NA coding upstream 213725 33869403 ~ 33908993 (-)
cass4 cass4 coding upstream 318758 33974436 ~ 33992918 (-)
cstf1 cstf1 coding upstream 338045 33993723 ~ 34013694 (-)
pdrg1 pdrg1 coding upstream 431802 34087480 ~ 34107842 (-)
G43414 NA non-coding downstream 85933 33568698 ~ 33568916 (-)
G43410 NA non-coding downstream 99661 33553378 ~ 33555188 (-)
G43405 NA non-coding downstream 130899 33523584 ~ 33523950 (-)
G43402 NA non-coding downstream 135713 33518777 ~ 33519136 (-)
G43401 LOC105888650,LOC101068541,LOC105896821,LOC106933405,LOC105891059,LOC106527799 non-coding downstream 137481 33516898 ~ 33517368 (-)
G43481 NA non-coding upstream 210313 33865991 ~ 33866441 (-)
G43479 NA non-coding upstream 211815 33867493 ~ 33868536 (-)
G43480 NA non-coding upstream 213008 33868686 ~ 33869162 (-)
G43567 NA non-coding upstream 512554 34168232 ~ 34168443 (-)
G43591 NA non-coding upstream 723628 34379306 ~ 34379530 (-)
LOC120557840 svbp other downstream 123982 33526497 ~ 33530867 (-)
LOC120557803 NA other downstream 431591 33188068 ~ 33223258 (-)
podxl2 podxl2,LOC102777608 other downstream 871013 32750792 ~ 32783836 (-)
LOC120557401 blcap other downstream 907739 32688020 ~ 32747110 (-)
LOC120557755 grip2,LOC103357845,LOC102782189 other downstream 2639202 30946332 ~ 31015647 (-)
LOC120557811 fam120a other upstream 255702 33911380 ~ 33953932 (-)
setd5 setd5 other upstream 1203144 34858822 ~ 34925111 (-)
slc2a10 slc2a10 other upstream 1796327 35452005 ~ 35464535 (-)
si:ch73-267c23.10 LOC104930309,LOC102192274,LOC101472365,LOC100702990,LOC106959684,LOC103152714,LOC103465506,LOC104941013 other upstream 1835146 35490824 ~ 35510748 (-)
LOC120558078 LOC107663605,LOC107698917 other upstream 2227554 35883232 ~ 35884416 (-)

Expression


Co-expression Network