G43938


Basic Information

Item Value
gene id G43938
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053115.1
NCBI id CM020912.1
chromosome length 44863486
location 35404132 ~ 35404347 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU58946
gtacaaagagtcgatGGCTATGAAGATGATACACGTCCCGTCTCGTCCATAGACTGTTACAGTCTATCGTCTCGTCCAAGGGGATAATGGTGCGTTTTtatcttgtaatcgcgactcgTAGCTCGATTGTGACGTGTAGAGAAATtctaaaagacgtgttcgtttgatttctgaggaggaaggagaggcttgggtcgaattgaaagattaagcaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU58946 True 216 lncRNA 0.44 1 35404132 35404347

Neighbor

gene id symbol gene type direction distance location
plxnb1b plxnb1,LOC102214007,LOC101475072,LOC103465508,LOC103373511 coding downstream 252329 34947770 ~ 35151803 (-)
si:dkey-19e4.5 LOC104930301,LOC103373509,LOC100704252,LOC104955611 coding downstream 465858 34926998 ~ 34938274 (-)
mtmr14 mtmr14 coding downstream 618748 34738030 ~ 34785384 (-)
si:dkey-156n14.3 LOC104932229 coding downstream 744926 34643322 ~ 34659206 (-)
LOC120557818 klf15 coding downstream 769414 34577458 ~ 34634718 (-)
LOC120557096 NA coding upstream 138155 35542502 ~ 35556629 (-)
LOC120557733 LOC104952937,LOC104935842,LOC103372836,LOC101471787,LOC100710053,LOC102777199,LOC102309213 coding upstream 160501 35564848 ~ 35579017 (-)
LOC120558074 NA coding upstream 184593 35588940 ~ 35617881 (-)
stmn3 stmn3 coding upstream 215021 35619368 ~ 35665708 (-)
arfrp1 arfrp1 coding upstream 259761 35664108 ~ 35669845 (-)
G43937 NA non-coding downstream 615 35403266 ~ 35403517 (-)
LOC120557994 NA non-coding downstream 15505 35387897 ~ 35388627 (-)
G43827 NA non-coding downstream 109397 35294522 ~ 35294735 (-)
G43824 NA non-coding downstream 112623 35291186 ~ 35291509 (-)
G43818 NA non-coding downstream 165021 35238910 ~ 35239111 (-)
LOC120557479 NA non-coding upstream 7617 35411964 ~ 35412388 (-)
G43942 NA non-coding upstream 11534 35415881 ~ 35416380 (-)
G43935 NA non-coding upstream 22056 35426403 ~ 35428681 (-)
G43964 NA non-coding upstream 128183 35532530 ~ 35532792 (-)
G43974 NA non-coding upstream 201359 35605706 ~ 35606880 (-)
setd5 setd5 other downstream 479021 34858822 ~ 34925111 (-)
LOC120557811 fam120a other downstream 1450200 33911380 ~ 33953932 (-)
LOC120557840 svbp other downstream 1873265 33526497 ~ 33530867 (-)
LOC120557803 NA other downstream 2180874 33188068 ~ 33223258 (-)
podxl2 podxl2,LOC102777608 other downstream 2620296 32750792 ~ 32783836 (-)
slc2a10 slc2a10 other upstream 47658 35452005 ~ 35464535 (-)
si:ch73-267c23.10 LOC104930309,LOC102192274,LOC101472365,LOC100702990,LOC106959684,LOC103152714,LOC103465506,LOC104941013 other upstream 86477 35490824 ~ 35510748 (-)
LOC120558078 LOC107663605,LOC107698917 other upstream 478885 35883232 ~ 35884416 (-)
trnac-gca_4 NA other upstream 504089 35908436 ~ 35908507 (-)
trnac-gca_5 NA other upstream 505350 35909697 ~ 35909768 (-)

Expression


Co-expression Network