wfdc2 (LOC104919425,LOC106572146)


Basic Information

Item Value
gene id wfdc2
gene name LOC104919425,LOC106572146
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 24794869 ~ 24796108 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799399.1
TTGTCCAAACAGGAGTACATTCTTGTGAGAAAGAAGTTAACATGGAGCAACACTGGTCCGCAGTTTGTGCAGTGATTTTAGCACTCGGTGCATCGGTGCACTTTGACATTGTTTTTGCTGCAGAAGCTGATGGCAATTTAACAGTGATTCTTCCAAAACCTGGCCACTGCCCACGTCGCCTTAATGTTGTCCCATCACataaggggtgtgtgtgtgatgaagaCTGTCCTGCTGACCACAAATGCTGTGTCTTTGACTGTGGAGCTGTCTGTGTCCCTCCTGCTTTCACTAAACCAGGAGTGTGTCCTCGCAGGCACTGGGGCTCAGGACTGTGTGCTGAATTTTGCTCCAATGACAGCGACTGCCCCAAGGATGAGAAGTGCTGCCACAATGGATGTGGACACGAGTGCATTGCACCATACACAGTGAAGCCGGGTCGCTGCGCCCTTCCCCAGGGAACCCCCATGTGTGCTGAGTACTGCTACCACGATGGTCAGTGTCCAGGAGAGCAGAAGTGCTGCAAGACAACCTGCGGCCACGCCTGCAGTGAGCCCTGCTGATTGGACAGCTCTGCGACACTTCGTTAATCTTTAATGCAACAACGCAGAAAAAGCATCATGTTCATTTTCCCTACCTTTTCAACTCCGTAGTAGCACACTTTGGTACAATACTTGAGCATTGGCTTGCACAAAGTTGGATtctttgtgggaaaaaaaagttaattgttTTCCTTCAATCTAGATAAGATGCTATTCTatgtactttaagtacagtcatgtgaaacaattaggacacccatgctaaagttgactaaaaagaggaataaaaaaaaatc
>XM_039799400.1
ATTTGTCCAAACAGGAGTACATTCTTGTGAGAAAGAAGTTAACATGGAGCAACACTGGTCCGCAGTTTGTGCAGTGATTTTAGCACTCGGTGCATCGGTGCACTTTGACATTGTTTTTGCTGCAGAAGCTGATGGCAATTTAACAGCTAAACCAGGAGTGTGTCCTCGCAGGCACTGGGGCTCAGGACTGTGTGCTGAATTTTGCTCCAATGACAGCGACTGCCCCAAGGATGAGAAGTGCTGCCACAATGGATGTGGACACGAGTGCATTGCACCATACACAGTGAAGCCGGGTCGCTGCGCCCTTCCCCAGGGAACCCCCATGTGTGCTGAGTACTGCTACCACGATGGTCAGTGTCCAGGAGAGCAGAAGTGCTGCAAGACAACCTGCGGCCACGCCTGCAGTGAGCCCTGCTGATTGGACAGCTCTGCGACACTTCGTTAATCTTTAATGCAACAACGCAGAAAAAGCATCATGTTCATTTTCCCTACCTTTTCAACTCCGTAGTAGCACACTTTGGTACAATACTTGAGCATTGGCTTGCACAAAGTTGGATtctttgtgggaaaaaaaagttaattgttTTCCTTCAATCTAGATAAGATGCTATTCTatgtactttaagtacagtcatgtgaaacaattaggacacccatgctaaagttgactaaaaagaggaataaaaaaaaatca

Function

NR:

description
PREDICTED: perlwapin-like isoform X1

GO: NA

KEGG:

id description
K23637 WFDC3; WAP four-disulfide core domain protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799399.1 True 835 mRNA 0.47 4 24794870 24796106
XM_039799400.1 False 694 mRNA 0.46 3 24794869 24796108

Neighbor

gene id symbol gene type direction distance location
fam217ba fam217b,LOC102078452 coding downstream 75195 24715722 ~ 24719674 (-)
edn3b NA coding downstream 96887 24688599 ~ 24697982 (-)
si:dkey-178k16.1 epb41l1,LOC103363988,LOC102294250,LOC102199659 coding downstream 123071 24634771 ~ 24671798 (-)
cntn3a.2 LOC103363983,LOC100703160,LOC104954126,LOC102301181,LOC102197109 coding downstream 367801 24390197 ~ 24427068 (-)
exosc10 exosc10,LOC102796841 coding downstream 410261 24370418 ~ 24384608 (-)
LOC120559637 LOC103353002 coding upstream 151653 24947761 ~ 24958164 (-)
LOC120559745 LOC103353003,LOC104920211,LOC100699381,LOC101479901 coding upstream 173836 24969944 ~ 24990360 (-)
ttc34 ttc34 coding upstream 203770 24999878 ~ 25006135 (-)
si:ch211-112c15.8 NA coding upstream 212170 25008278 ~ 25020847 (-)
ccdc30 LOC103353009 coding upstream 238527 25034635 ~ 25054253 (-)
G52818 NA non-coding downstream 88865 24705517 ~ 24706004 (-)
G52776 chl1,LOC101079354 non-coding downstream 326850 24466034 ~ 24468019 (-)
G52765 NA non-coding downstream 408248 24385903 ~ 24386621 (-)
G52746 NA non-coding downstream 427400 24367149 ~ 24367469 (-)
G52732 NA non-coding downstream 467893 24325020 ~ 24326976 (-)
G52883 NA non-coding upstream 124608 24920716 ~ 24945315 (-)
LOC120559116 LOC103353002,LOC102301713,LOC102203634,LOC101480204,LOC104956590 non-coding upstream 129649 24925757 ~ 24928651 (-)
G52893 NA non-coding upstream 163683 24959791 ~ 24960183 (-)
G52935 alas2,LOC108236847,LOC106524166 non-coding upstream 194875 24990983 ~ 24996820 (-)
G52936 alas2,LOC106524166 non-coding upstream 202010 24998118 ~ 24999647 (-)
phactr3a LOC100701276,LOC107550338,LOC107551495,LOC104947949,LOC103365918,LOC106955159 other downstream 9864 24750431 ~ 24785005 (-)
masp2 masp2,LOC106536928,LOC103357864,LOC107086886 other downstream 455413 24335149 ~ 24339456 (-)
G52501 eno1,LOC104965722,LOC103151087 other downstream 1475185 23308500 ~ 23319684 (-)
si:ch211-150o23.3 LOC103367744,LOC101075068 other downstream 1575969 23214098 ~ 23218900 (-)
G52226 NA other downstream 2264161 22529606 ~ 22530708 (-)
acot7 acot7,LOC102782704 other upstream 1114647 25910755 ~ 25972322 (-)
emc1 NA other upstream 1340890 26136998 ~ 26147245 (-)
G53196 NA other upstream 1416885 26212993 ~ 26214882 (-)
LOC120559114 LOC101164642,LOC104966947,LOC100690915,LOC104926428,LOC102195969,LOC101062277 other upstream 1595904 26392012 ~ 26402310 (-)
dcp1a dcp1a other upstream 1850706 26646814 ~ 26658321 (-)

Expression


Co-expression Network