ttc34 (ttc34)


Basic Information

Item Value
gene id ttc34
gene name ttc34
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 24999878 ~ 25006135 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800438.1
ttaaccGTCGATGCTGTCATCACCGTGAATAGGTGAAGAGAGAAAAACGAATGGAGAGGGACTGCTGCCTGATCATGTCTGCTCTGGTTCGACCTGGAGTTAATGTTTCAGAGCTATGTAAGGATGGAGACAAGTTCCTTGAGGCTGGAGAGTTGGGGAGGGCTACCTCTCTCTACATGTCTGCCTTCAGGACTCACGCCGCCTCCACCGTGTCCCACATGCGGAACTTGAAGTCAGGCATGGGTGGGGTGATCTCTACTCTAGAAGGATGGCTTGACAGTCATGGGGAGAACCACCCTGTTCCGGGTTTTAACAAAGGTCTTGCAgctgtgtttctgtccacaCTCTGCCCTAACAATCTGTCAGCCACAATTTTTAAGATGGAATCACTCCTTCAGAGTGGCGTGCATGGCTGCGAGGAGATTTTTGCTCGCTGCACTGCTCTGCTTGAAGGGATGCAAAACCCTCATCCACAAGATGCGACTCGCATGGTGTTGGAGATAACTCGTGCCCTGGCCTGCTTGCTCTCAGAGACTCACAGTATCAAGGGCCTGAAGCTTTACCTCAAAGCTTACCAGAGTAACAAATCTGAAACCGTCACACTGGTGAAAAGCAGACAAGCTCAGCACCTTACCAAAATAGTGATGGCCTTTACAGACCAAATACTGCACATACATCCCTCCCTGATATCTGACAGCGAGTGTGCAGTGACAACAAAGGAGAATGATAAGCTAGATGTAGAGGCTTCTTCTTGTTCTACAATTATTGAGTTTTTGTTGGCTATCTCACCTGGCAATAGAGAAGTGCATGAACTTCAAGCAGcatatttatttttgacaggcaGGTTTATGGACAGTGCAGAGGTGTACTCTGCTCTCTTGCATCATGGTAATTGTCAGAAAACATCAGAGTGTAGCACAGACAAATCATACCAAGACCCTCCTGAGAGGAGAGCTAGACTCTTAACCAGTCGAGCAGCTGCCTGCTTGTCTGCAGGTGGACGGACCGCGGAGGCATGCAGGGATCTGGGTGAAGCATTTGAGTTTCACCCTGCCACTGCCcgaatttattttcaaaagctATTCACAGATCATGGTACTGCTCGCAACCATCTCCGTCAGCAGGCAGAGAGAGGCCTGTATGGTTACAGAGAACGGGTCACCATCCGTCCAGACCTGAGGTCCTCTGAAGGAGTTGAGCTCCTGGACCCTGTGATCACTCAGTTACGGACTCTGTGCCATTTAGAGCCTGACGGGGGAGGCAGAGAGTTGCGAGTACGACTGGCTGACTGTCTGCTCCTCAGAGGGGAACACAAAGAGACCCTCTCCATCTGTAGCCAGCTAGCTGCTGCCCAAGGTCAGCAGAGCTATCAAAACACGGTGCAGGTTCTTTGTGGATATGCACGACTTCTCTCAGATGACCACAAGGGGGCGTTAGAAGACTTCCAGGCTGTGATTGAACACAATGCCCCCCACCCATCCAGCTGTGTGCGTGCCCTCTGTGGCAGGGGGCTCCTGCGAATGATGGGCGGCTTACACTACCTCACAGCTCTTGACTATGTGACAGCTAGCAGGCTGCACCCTCAGGAAACCGCACTGACTGTTCGCTGCTTGGTGCCATGGAACTACAGGGGGCTGCTGTTTACTGTTTTACTAGAGCAGGGACGAGTCATGCTGGAGGGGACAGGGGAGCACGAATCCAAGTCCAGTTCAAGTGAAGACTCCCAACAGCCCCAGCAGGGGGATCAGCCCCAGGCCCcttcaaagagaaaaaaacacagatcaggGACTCCAGCTGGTGTCCAGTCTCTAGCTGTGCTGCTGATGGAGCTCCAGCCCGGTGATGATGGGTCTCAGATTCTGGCAGCAGATGCTTTGTACCAGCTTGGCCGAGTGGAGGAGGCCTACCGCCTACTACTTTCCATTGGGCCCAGCAGTCCTCGGGCACCCATCCTGGCTCGCCTCGCCCTGCTACAGCTGCACAGAGGCTTTCTTTATGACACCAATCAGCTGCTTAAAAAGCTCATTCAGTGTGGCGATACGAGCTGCTTGCGCCCCCTGTTGGCGGTAGCACAACAGAAGGACCGGGCTCTTCTGCAGGCGCACTGCCACTCTGCTGCTAAACGCATCCTGGAGGGCACGCGAGAGGAGAGCACCATCAGGGAGGCTGTGGCATATCTCTCCATTGCCATCATGGCCTCTGgtGGCGTGGCAGCAGAGTCTTTACTAGAGAGAGCGAGGTGTTATGCCCTGCTGGGCCAACGAAAGACAGCCATCTTTGATTTCAGTGCCATACTGAAGGAGCACCCGAAACATGTTCAGGCCCTCTGTGGAAGAGGCTTCACCTATCTCATGCTGAACCAacaaaaaGAATGCACTCATGATATACTGGCAGCCCTTCAGATAAACACTGACATAGTCACCAAAGACATCCTATCACTCAAGGACAAGGCACGAAAgcttgtctgtgattggctgcatcAGCTCTGTCGGACCAATCTGTCGGACATCCTGCTCGCCAATGCTGTCCCCTGCCATGAAGAGCAGCTCAGAGAGGCTTTTACAATTGGTGGAGCTCTGATGAAGACAGACTGCAGAGACCCCAGATGGCATCTCCTCTATGTGGACATACTTTTAGCCAAAGGTGAAGTTAAGGCAGCAGGCGCTCATCTGTGCCAGGTGTTTGGCCAGGAGCCGAGAGATGCAGTGGCCCAGGCCAGGGTGGGTGTGCTGGAGGCCTGGAAGCAGAACTACCGCAGCGCAGCTCGCAGGCTCAGCAAACTGACTGAGAAAGATTTGTCCAGTCTGGGCTTCTTGCTGGCCCTTATCCCATTCAATCAGCGCAAATGCATGGCACAGGCAGCAGCACAGGAGGCCAGCAGTGTGTCATCAGGTGGCCAGTGGGATCAGGCCCTCAAACTCCTGACTGTGGCAGTACAAGCAGTGGGCAATTACAGACTCCAGTATCTTCGCCAGCGGGCTGCGTGCCTCGCTCACCTGGGCCTACACGAGCGGGCCATAGCTGACCTGGACAGAGTTATCCAGAAACACAATGGATCTGATGCCAGCTGCTCAGATGAGTCCCAAGTGTGGGCAGAAGACCTGTGTCGGCGAGGCCACAGCCTGGTGCTATGTTCCAGAGAAGGAGCTGCTCTAGAGGACTTTACTCGGGCCTTGGAGCTCCACAGGAACCAAGCCATCCAGTGTGTGGAGGCTGGTCTGGGGAGGCTACGTCTGGCTGAGTGCTTCCTGCGGGGAGCACTGCAGCACTATGGGGAGCAGCAGCTCAGTAAAGCCTGGACAATGATTGAAAGTGGTCTAGTTGTGGACAGTGACAACACAGAGCTACGCAGACTGAGGGCAAAGGTCAAACGAGAAGTAGCCAGCCCCTGCAATGTCAACTAG

Function

symbol description
ttc34 Orthologous to human TTC34 (tetratricopeptide repeat domain 34).

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K24947 TTC34; tetratricopeptide repeat protein 34

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800438.1 True 3404 mRNA 0.53 7 24999878 25006135

Neighbor

gene id symbol gene type direction distance location
LOC120559745 LOC103353003,LOC104920211,LOC100699381,LOC101479901 coding downstream 9518 24969944 ~ 24990360 (-)
LOC120559637 LOC103353002 coding downstream 41714 24947761 ~ 24958164 (-)
wfdc2 LOC104919425,LOC106572146 coding downstream 203770 24794869 ~ 24796108 (-)
fam217ba fam217b,LOC102078452 coding downstream 280204 24715722 ~ 24719674 (-)
edn3b NA coding downstream 301896 24688599 ~ 24697982 (-)
si:ch211-112c15.8 NA coding upstream 2143 25008278 ~ 25020847 (-)
ccdc30 LOC103353009 coding upstream 28500 25034635 ~ 25054253 (-)
rimkla rimkla coding upstream 60689 25066824 ~ 25082881 (-)
LOC120559015 LOC103353028 coding upstream 423272 25429407 ~ 25433698 (-)
LOC120558818 LOC104944186 coding upstream 427764 25433899 ~ 25438353 (-)
G52936 alas2,LOC106524166 non-coding downstream 231 24998118 ~ 24999647 (-)
G52935 alas2,LOC108236847,LOC106524166 non-coding downstream 3058 24990983 ~ 24996820 (-)
G52893 NA non-coding downstream 39695 24959791 ~ 24960183 (-)
G52883 NA non-coding downstream 54563 24920716 ~ 24945315 (-)
LOC120559116 LOC103353002,LOC102301713,LOC102203634,LOC101480204,LOC104956590 non-coding downstream 71227 24925757 ~ 24928651 (-)
LOC120558684 NA non-coding upstream 78672 25084807 ~ 25085797 (-)
G52961 NA non-coding upstream 92970 25099105 ~ 25166197 (-)
G53004 LOC104953341 non-coding upstream 419209 25425344 ~ 25428943 (-)
G53006 NA non-coding upstream 437013 25443148 ~ 25446575 (-)
G53027 NA non-coding upstream 524718 25530853 ~ 25533053 (-)
phactr3a LOC100701276,LOC107550338,LOC107551495,LOC104947949,LOC103365918,LOC106955159 other downstream 214873 24750431 ~ 24785005 (-)
masp2 masp2,LOC106536928,LOC103357864,LOC107086886 other downstream 660422 24335149 ~ 24339456 (-)
G52501 eno1,LOC104965722,LOC103151087 other downstream 1680194 23308500 ~ 23319684 (-)
si:ch211-150o23.3 LOC103367744,LOC101075068 other downstream 1780978 23214098 ~ 23218900 (-)
G52226 NA other downstream 2469170 22529606 ~ 22530708 (-)
acot7 acot7,LOC102782704 other upstream 904620 25910755 ~ 25972322 (-)
emc1 NA other upstream 1130863 26136998 ~ 26147245 (-)
G53196 NA other upstream 1206858 26212993 ~ 26214882 (-)
LOC120559114 LOC101164642,LOC104966947,LOC100690915,LOC104926428,LOC102195969,LOC101062277 other upstream 1385877 26392012 ~ 26402310 (-)
dcp1a dcp1a other upstream 1640679 26646814 ~ 26658321 (-)

Expression


Co-expression Network