LOC120559397


Basic Information

Item Value
gene id LOC120559397
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 2488542 ~ 2491124 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801092.1
gaaggagaccagagcatctcagtcagctttaaactctctgaaacatgattcaagatgtaagaaaacattcagctgctctgagtgtgggaaaatATATGGCTTCAAGTCAGATCTTAAGAGACACATGATAACTCATACAGGAGAAAagccttttagctgctctgagtgtggtaaaGCTTTCTCTGATAGTGGAAACCTGAAGAAACACATGataatccacacaggagaaaagcctttcagctgcagtgtttgtagtAAATATTTTACATATAGCGGaaatttacagaaacacatgagaatccacacaggagaaaaactagtcagctgctcagtctgtgagaaatcttttacacataGTGAAAATTTACGGtcacacatgagaactcacacaggagataagccttttagctgctctgagtgtggtagAGTTTTCACTGAACGTGGAACCCTGAAGAAACACATGATGACTCATtctggagaaaaacctttcagctgctcagtctgtaagaaatgttttacacagagtggacatttacaaaaacacataagaatccacacaggagagaagccttttagctgctcagtttgtaataaatcttttacaCTGAGTGAAAATTTACGGTCACACATggtagtccacacaggagaaaaatctttcagctgctcagtttgtaagatATCTTTTACACGGAGAGACAGTTTACGGTCACACATGGCAGTCCACACtggagagaaaagattcagctgcagtgtttgtaacaaaagatttgcctggCGTTCTCATGTCAAAagacataaatgtgttggtccgatggaaacagaagctgatggagaggactgtggaggaccagaaccagccaggaactcgcATCCACATCcccttttacaaccagagactgaagaccagactggagactcttctgatcaTGAGACTGTGAGGGTAACACATGGGAGCCGGAAGACAACCTGGACTGCCCCGACCTTATTGCCgagtacatgcagaaacacaaggagaaggaggagaaaaaggagggcaagaggaaagttgtcagtgaggCCTTAGGAGACTCAGAGGAGCgagggagcaagaggaagaaggaggtgAGCGAAGGAAAGAAGGTACTCCAGACTGAAGAGTCCCAGAAATACAATCTCAGTAttaatgaatgcacacagagagTTTCACAAATGTCGTTTaggatttatatataaatgactcgACATTGCAATATGCACATGCGTATACATACATGCAAAATAGTAGGGGTACAATGGATCACCAAACTCATGGTTCGGTTTGGATCATGGTTTTGAGTCACAGATCGGATAAATCtttcggatcagcacaaa

Function

GO: NA

KEGG:

id description
ko03420 Nucleotide excision repair

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801092.1 True 1350 mRNA 0.42 2 2488542 2491124

Neighbor

gene id symbol gene type direction distance location
LOC120559396 NA coding downstream 25861 2449190 ~ 2462681 (-)
LOC120559393 NA coding downstream 65230 2420724 ~ 2423312 (-)
LOC120558508 LOC104956416 coding downstream 96237 2391049 ~ 2392305 (-)
LOC120559398 LOC106959278 coding downstream 160429 2322320 ~ 2328113 (-)
LOC120559402 NA coding downstream 247444 2236290 ~ 2241098 (-)
LOC120558513 NA coding upstream 41688 2532812 ~ 2545241 (-)
LOC120558520 NA coding upstream 77686 2568810 ~ 2570974 (-)
LOC120559399 NA coding upstream 125236 2616360 ~ 2617600 (-)
LOC120558522 NA coding upstream 136598 2627722 ~ 2629202 (-)
LOC120559408 NA coding upstream 227979 2719103 ~ 2726894 (-)
G46732 NA non-coding downstream 22740 2464071 ~ 2465802 (-)
G46705 NA non-coding downstream 135981 2347782 ~ 2352561 (-)
LOC120559437 NA non-coding downstream 142264 2344485 ~ 2346278 (-)
G46701 NA non-coding downstream 149680 2337348 ~ 2338862 (-)
G46466 NA non-coding downstream 290025 2180796 ~ 2198517 (-)
G46746 NA non-coding upstream 5855 2496979 ~ 2566450 (-)
LOC120559435 NA non-coding upstream 31413 2522537 ~ 2523498 (-)
LOC120559433 NA non-coding upstream 169607 2660731 ~ 2662712 (-)
G46798 NA non-coding upstream 195001 2686125 ~ 2686554 (-)
trnaq-cug_2 NA non-coding upstream 453132 2944256 ~ 2944327 (-)
G46698 NA other downstream 141038 2346505 ~ 2347504 (-)
LOC120559407 NA other downstream 152841 2329654 ~ 2335701 (-)
rps21 rps21 other downstream 1243314 1236385 ~ 1245228 (-)
G46199 NA other downstream 1506431 976808 ~ 982111 (-)
LOC120558775 adrm1 other downstream 1550340 933032 ~ 938202 (-)
G46817 NA other upstream 791917 3283041 ~ 3285923 (-)
LOC120559401 NA other upstream 999880 3491004 ~ 3493963 (-)
LOC120559679 LOC103384848,LOC102790723,LOC100693496 other upstream 1443387 3934511 ~ 3950171 (-)
G47058 NA other upstream 1463902 3955026 ~ 3955529 (-)
G47059 LOC102202574 other upstream 1464480 3955604 ~ 3956382 (-)

Expression


Co-expression Network