LOC120559398 (LOC106959278)


Basic Information

Item Value
gene id LOC120559398
gene name LOC106959278
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 2322320 ~ 2328113 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801093.1
aacgttcaagggggccgaatactttcgcaaggcactgtatatatacatatacagccTATCCATCAAGTGCACAGATAAGTGATGTTGCTGAGGCACTTGTCAGTAAGTATCCTTGTCTTAAGGAACCCGGCTCCTTCTCAGGTTACTATGGATGGCAACAAAGCATCAAATACAAGATGGCAAATTATCGCACCAAACTCCGAGGCTATGGTGTTCCTGGGGTAATGTGTAATGCACTGAAACACAAGAGCCCAGCAAACCAGAAGTCTGCAAAGAATGTAAAAAAACCTCGAAAGGCAGAGGTAAACTACCTCCCCCCTTACCCGGCaggagaggatgaagaaagtcAAGAACAAGAGAGGATTCAGTTGCTTACTGAAGTAAGAAAAAGGGACAACAACAAATTGATCAAAgaaaaaatggccaaaacatTTGCACACAGAAGAAACAAAATCATCAACCTATCACCCAGCATAGAGGACATCAAAACCAGATGGCCTGCTCTATTTGAGCCCTCTCAACTCCAGGATGAGTTTCACAGAATCACAATGGTGCATCTTGAATCAAAGTTCATGTCTAAGCTGGATGAATACACTCCGAGGCTTCTGAACATCTTCCACTCCAAAGGTGGAACCATGGGGTTGAGGTTGCAGGCCATCCTACTCAAGGCTCCAAGCAACCATAGCATCAGCATGACCAGAGATGTTGTCATTCGGTGTTTGATGGTGTACCTTGGGGAATCCACAGATCAACTCTTAAAGGAGTATGATGATGCTGATGAAGACAGTGTGTCGCAGGACCTTGCTGTACAAAGGATTAAAATCTACCACATCAAGACTACTACGCCAGAGGGTCCTGATGACATCGGTATCGTAGTAGAGGGCGTGAAAGTTCTGACTGCTCTGGGTAACTTTCCAAGGGCTTGCTCCATGGTCATTGGCTTGGCATATGCAGTGAATCTTGCCTATCCCAAGGAGGTCAGGTACACGCTTGAAGTCTTCCAGAAACTCCTCCTTGAGCTGGATTATTCAAAGCTGTCCCCAAAAGTGAACAGCCTCAAGAATAAGCTACTAGCTTGAGAAAAGGGACCCTCGCAGAATGACAGGGAACAATTAACTCACTGTCAAAACTGTCACATGGTTACCCACTTACTGTGAAGGAACTGCAAACTGTTACTGAAGGAGGCCTTTGGAATTTCTGATGAGTTCAGTCTTTAGTATTTGGACTTGGAATTTGAAGATTACTTTACTCTTCATAAAAGTGACCAAATTAAACATAAAGACACCATAAAGATTGTTCACGCTGCCCTGATTGTTCTCAACTTGCTTCCACTTAATGAAAGTTTgggcatttcctttttttcaactGTTAAGTaactaaaaaatattgatttttcAGTGCAACATGTGGTTGTTTAGAAATATCAAACCAATCATACTCATTTTACGGGAGTGGTATTGTGATTTTGAATTTGTATTGCTACAGGCAGCTGTTATTGTACCTTGTGATTCCTCTGTGTACACCAGGGATGCaaatttgacatgttttaattgagGAATTTTAACAAATTAATGTGATTGTTTAAGTGAGTCTTATTTTAGCAAAAAGTACAGAAGTAAGGATAATGGAATTACTTGACCTTATCCCAGACTCCATGTGATATTAATCAATTACTTTTAGCCGTTTAATGGCCCTGACGATTTCAATTGGCacataaatgaaaatgtaagaaaaatttGCAGACTGAAAACATTGTCTTAATTTAAATGCACTAACAGGACTAAACCTTAAATCACATCACAAATCACTGTGGATAATTTAAGCCAATGACGTAGCAGAAATTAAACACCATTAAATgattaaacatttattaaaaagaatCCCAAATGCCATTCTATTGTGTCCCTATTGTACACATTCATGGtttctgccttttttattttttgtcttatagcctctctctgtgttttattgttgtattttggcaTTTTGCACTAAACAACTTGAAAAATGTTAGATAAACATGTTTagaaaaaaatggacaaaaatgtTTGCCTGCTGTTCTTATTATGCATGATGATTTATTAACCCAATTTAAGTTACCTGTGGTACCAAGAAGGCATGATATTGAGTGTATTATACATAGAAAAATGATGGcaacaaagtgacacaaattaAAACTTCAATGTAAACAATTCATTTAGGTACGGATAAATAAGAAACGCAGTGTAAATGTGTTGAATTAGGCAACAATGTGCTAAAATATTAGTtagtataatttattttatgtcagtgaatacaaattatttttacCCAGATATTTAGAAAATCTAAATTAATTTCTCCCAGATATTTAGTGAATCTAAATTAATTTCTCCCAGATATTTAGTGAATCTAAATTAATTTCTCCCAGATATTTAGTGAATCTAAATTAATTTCTCCCAGATATTTAGTGAATCTAAATTAATTTCTCCCAGATATTTAGTGAATCTAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106959278

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801093.1 True 2494 mRNA 0.37 4 2322320 2328113

Neighbor

gene id symbol gene type direction distance location
LOC120559402 NA coding downstream 81222 2236290 ~ 2241098 (-)
LOC120558496 NA coding downstream 216709 2058191 ~ 2105611 (-)
LOC120558495 NA coding downstream 297882 2023301 ~ 2024438 (-)
LOC120559416 NA coding downstream 415997 1904835 ~ 1906323 (-)
LOC120559394 NA coding downstream 535128 1783811 ~ 1787192 (-)
LOC120558508 LOC104956416 coding upstream 62936 2391049 ~ 2392305 (-)
LOC120559393 NA coding upstream 92611 2420724 ~ 2423312 (-)
LOC120559396 NA coding upstream 121077 2449190 ~ 2462681 (-)
LOC120559397 NA coding upstream 160429 2488542 ~ 2491124 (-)
LOC120558513 NA coding upstream 204699 2532812 ~ 2545241 (-)
G46466 NA non-coding downstream 123803 2180796 ~ 2198517 (-)
LOC120559423 NA non-coding downstream 142112 2130821 ~ 2180208 (-)
LOC120559440 NA non-coding downstream 273632 2035867 ~ 2048688 (-)
LOC120559424 NA non-coding downstream 329322 1992230 ~ 1992998 (-)
G46386 LOC107707896 non-coding downstream 417703 1904014 ~ 1904617 (-)
G46701 NA non-coding upstream 9235 2337348 ~ 2338862 (-)
LOC120559437 NA non-coding upstream 16372 2344485 ~ 2346278 (-)
G46705 NA non-coding upstream 19669 2347782 ~ 2352561 (-)
G46732 NA non-coding upstream 135958 2464071 ~ 2465802 (-)
G46746 NA non-coding upstream 168866 2496979 ~ 2566450 (-)
rps21 rps21 other downstream 1077092 1236385 ~ 1245228 (-)
G46199 NA other downstream 1340209 976808 ~ 982111 (-)
LOC120558775 adrm1 other downstream 1384118 933032 ~ 938202 (-)
tpd52l2b NA other downstream 1394701 920249 ~ 927619 (-)
trnas-aga_6 NA other downstream 1416736 905500 ~ 905584 (-)
LOC120559407 NA other upstream 1541 2329654 ~ 2335701 (-)
G46698 NA other upstream 18392 2346505 ~ 2347504 (-)
G46817 NA other upstream 954928 3283041 ~ 3285923 (-)
LOC120559401 NA other upstream 1162891 3491004 ~ 3493963 (-)
LOC120559679 LOC103384848,LOC102790723,LOC100693496 other upstream 1606398 3934511 ~ 3950171 (-)

Expression


Co-expression Network