LOC120559643


Basic Information

Item Value
gene id LOC120559643
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 23259471 ~ 23261385 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801524.1
AGCAtttcagctgcagcagctctggAGGGATTCCTGACATCTGCACCGTCTTTACCAAGAACCCAGAAACTCAGAGAAGTCTGCTGCTTAATGAGAGGGTCATAAACTGGAGGAACAGACTCATATTCAGAGTGGGATCGATATCACAGAATATGGAGATTTTAACACCTTCATCTATCCCAGGCCAGAGAATATGGACTGGCAAGAGAAGGTGTTTCCACTGCCAATTTCCATTCTGGACGAATCCCACGCGGAGCTCGTCGACACACACTTGCCTTATGGAGGCAGCTGGAGGCAGCCAGGAGAGCCTCGACCACGTGAGAGTCTGTATACGCCATCTGCCAAACCACTGTGTTTCAGATGAGAAGGGCCGGCCTGTGTCCTGGATGCTGTCTAATGAGCTGTGTGAGCTGAGGATGGCCTACACCCTACCAGAGTACAGACGGGCCAGCCACCTCCTGGCTCTGTCTCTGGCTCTTATCCGCAGGATGGGCTCTGTGGGTCTGCCCGTCTACTGCCACGTCAACCAGCAGAACCAGGCCACCATTAACGCTGTGACCTTACTCGGCTTCTCTGCTTGTCCCAGTACGGAGAAGATCTCAGTGCTGCTAATATGCAAGGACAGAGTCTGAGTGATGACTAATGGCAATAAAGTCTGTTGGATGATTGAAACCACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801524.1 True 677 mRNA 0.52 3 23259471 23261385

Neighbor

gene id symbol gene type direction distance location
spsb1 spsb1 coding downstream 4880 23244807 ~ 23254591 (-)
slc25a33 slc25a33 coding downstream 27676 23222019 ~ 23231795 (-)
atp5pb atp5f1 coding downstream 66594 23187403 ~ 23192877 (-)
eps8l3b NA coding downstream 72398 23177237 ~ 23187073 (-)
gnat2 LOC104926845,LOC103367853,LOC102304204 coding downstream 121089 23131287 ~ 23138382 (-)
ca6 ca6,LOC102780476 coding upstream 31818 23293203 ~ 23299690 (-)
noc2l noc2l coding upstream 297512 23558897 ~ 23588252 (-)
perm1 LOC103364029 coding upstream 368056 23629441 ~ 23640398 (-)
her9 hes4,LOC102778090 coding upstream 439191 23700576 ~ 23702429 (-)
lzic lzic coding upstream 630414 23891799 ~ 23894184 (-)
G52477 NA non-coding downstream 22012 23236683 ~ 23237459 (-)
G52474 NA non-coding downstream 45534 23207837 ~ 23213937 (-)
G52471 NA non-coding downstream 54180 23204474 ~ 23205291 (-)
G52453 NA non-coding downstream 64370 23194241 ~ 23195101 (-)
G52451 NA non-coding downstream 86829 23170178 ~ 23172642 (-)
G52544 NA non-coding upstream 186701 23448086 ~ 23448625 (-)
G52574 NA non-coding upstream 441343 23702728 ~ 23702955 (-)
G52630 NA non-coding upstream 528063 23789448 ~ 23791103 (-)
G52633 NA non-coding upstream 547286 23808671 ~ 23809079 (-)
G52634 NA non-coding upstream 552744 23814129 ~ 23814406 (-)
si:ch211-150o23.3 LOC103367744,LOC101075068 other downstream 40571 23214098 ~ 23218900 (-)
G52226 NA other downstream 728763 22529606 ~ 22530708 (-)
LOC120559880 LOC104932903,LOC103358260,LOC104967532,LOC107390844 other downstream 1030050 22223149 ~ 22229421 (-)
si:dkey-151g10.3 wnk3 other downstream 1244428 21970052 ~ 22015043 (-)
esyt1a LOC104932417,LOC104956886,LOC103356920 other downstream 2042752 21199340 ~ 21216719 (-)
G52501 eno1,LOC104965722,LOC103151087 other upstream 47115 23308500 ~ 23319684 (-)
masp2 masp2,LOC106536928,LOC103357864,LOC107086886 other upstream 1073764 24335149 ~ 24339456 (-)
phactr3a LOC100701276,LOC107550338,LOC107551495,LOC104947949,LOC103365918,LOC106955159 other upstream 1489046 24750431 ~ 24785005 (-)
acot7 acot7,LOC102782704 other upstream 2649370 25910755 ~ 25972322 (-)
emc1 NA other upstream 2875613 26136998 ~ 26147245 (-)

Expression


Co-expression Network