G52451


Basic Information

Item Value
gene id G52451
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 23170178 ~ 23172642 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU70012
ctagcagtctgggtggggactaccacagagttgtcaataGTTATGGTCAAGTCctgggtaggagagcccttcccAAGTCTTGAACTTCCTCAACTGACCTTAACCAACTGCTGTACTGATTATGTGCATTTTTTGTATTCCTATTTATGCCTTAAATATGACTGGGAGCAACTAACTGAACACTTTCATGAGGGGACCAATAAAGTATTTGTGtcATCAACAATCACAAATATAAGTGATTTATCAggttaaaatacaaaacatttgctGCAGATTCTCAAATGAGAAGTTTTGAGGTTTGATATCGTTTTAACCACCGAGGTTTTTAAAACTGACAACTCCACAAGGTGTACAGCTTATACTAATTATCCAAcacctgcaacaacaacaaaaaaagaaaaaaaaaagaaaggcaaGGCTGTGCCTACTGATTTTGTTTTGGTCACATACAATTAATGTCATATTAAGGCCGATTAAtagaaaatgaattaaaatatgAGACAGTAGTTGTTTGTTCAGCCCCATCAGAAGGATTGCAGTTAACGTTAACCATTAGAGACTTCACTATCGTTACCTGAATTGGGTGTGCAAGTATCTACATACTAAAGCATGTCGGTCCCGATGTTCTGACAACTTTAGCTGCTCGGTTAGAAATACCGTTTTTTTGCCCCTTGCAAGTAGCTAGCAAATCGGACAggttaactaacgttagcaacgTTAACGTTAGTAGCAAAAGACAGTAACGTAAGCAACAGTTGATAACATTTTGATCATGTGCACCATGATGTGAACACCATAGATATAGCTAGAACAATGGTGCACACGAGTCCCAGCCCAGGTGTATCGTAGTTAACGTCACATCGCATGACATTTCGCGGAGCGAGACTTTGCTTAGAGTTCTTATACGTTACGTAGCGTTACTAAAATGTAAAGGTCAGTAGACTACTATTAAGTAGCTAAGTTAGCTAGATACAAAGAGTTTGAAAGTCAGGAACGCGGCGTGTGTTTTAAACCGAGGTCTTGCTCTGGATGTTTTCCAGCGACAGCCGTTAACGTTAACATCAACAGCGCTGCAAACAAcagaagctaacgttactttAATAACAAGGAAGACGGCTGAACTCACCCCACGAATATCCCAGTAAGCCAGTTTCATGGTCATTTTGGATCAAAAACTGTGAGAGAAAACTGCGGCTGCCTGTCGGCGACTTTAACAGTGTTGCTCTGAGATGGTGAGGTGGTTTCTTTCTGCAGCCTGTGAAATACCGCGAGCCTAGGAGGTGGGCGGGGTAAACCGGGCGGTTACACACATAGAATTTAACCGGTTCTTTTGTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU70012 True 1337 lncRNA 0.41 2 23170178 23172642

Neighbor

gene id symbol gene type direction distance location
gnat2 LOC104926845,LOC103367853,LOC102304204 coding downstream 31796 23131287 ~ 23138382 (-)
amigo1 amigo1,LOC102784317,LOC100710046,LOC104942231 coding downstream 93009 23069659 ~ 23077169 (-)
sort1b sort1,LOC104926808,LOC103367916 coding downstream 116945 23032915 ~ 23053233 (-)
nfyal nfya coding downstream 140570 23020769 ~ 23029608 (-)
ahcyl1 ahcyl1,LOC104942237 coding downstream 150138 23002911 ~ 23020040 (-)
eps8l3b NA coding upstream 4595 23177237 ~ 23187073 (-)
atp5pb atp5f1 coding upstream 14761 23187403 ~ 23192877 (-)
slc25a33 slc25a33 coding upstream 49377 23222019 ~ 23231795 (-)
spsb1 spsb1 coding upstream 72165 23244807 ~ 23254591 (-)
LOC120559643 NA coding upstream 86829 23259471 ~ 23261385 (-)
G52441 NA non-coding downstream 41377 23127642 ~ 23128801 (-)
G52428 NA non-coding downstream 102778 23066191 ~ 23067400 (-)
G52273 LOC106572836 non-coding downstream 554126 22611894 ~ 22616052 (-)
G52244 smc5,LOC102791010 non-coding downstream 600895 22568662 ~ 22569283 (-)
G52238 NA non-coding downstream 607637 22562202 ~ 22562541 (-)
G52453 NA non-coding upstream 21599 23194241 ~ 23195101 (-)
G52471 NA non-coding upstream 31832 23204474 ~ 23205291 (-)
G52474 NA non-coding upstream 35195 23207837 ~ 23213937 (-)
G52477 NA non-coding upstream 64041 23236683 ~ 23237459 (-)
G52544 NA non-coding upstream 275444 23448086 ~ 23448625 (-)
G52226 NA other downstream 639470 22529606 ~ 22530708 (-)
LOC120559880 LOC104932903,LOC103358260,LOC104967532,LOC107390844 other downstream 940757 22223149 ~ 22229421 (-)
si:dkey-151g10.3 wnk3 other downstream 1155135 21970052 ~ 22015043 (-)
esyt1a LOC104932417,LOC104956886,LOC103356920 other downstream 1953459 21199340 ~ 21216719 (-)
fmnl3 fmnl3 other downstream 1971135 21167904 ~ 21199043 (-)
si:ch211-150o23.3 LOC103367744,LOC101075068 other upstream 41456 23214098 ~ 23218900 (-)
G52501 eno1,LOC104965722,LOC103151087 other upstream 135858 23308500 ~ 23319684 (-)
masp2 masp2,LOC106536928,LOC103357864,LOC107086886 other upstream 1162507 24335149 ~ 24339456 (-)
phactr3a LOC100701276,LOC107550338,LOC107551495,LOC104947949,LOC103365918,LOC106955159 other upstream 1577789 24750431 ~ 24785005 (-)
acot7 acot7,LOC102782704 other upstream 2738113 25910755 ~ 25972322 (-)

Expression


Co-expression Network