G63076 (LOC103376870)


Basic Information

Item Value
gene id G63076
gene name LOC103376870
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 19746949 ~ 19747469 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU84485
ccaccacattccaaatatgttctattgggttgagatctggtgactgtgggggccattttagtacagcgaactcattgtcatgttcaagaaaccaatttgaaatgattcgagctttatgacatggtgcattatcctgctggaagtagccatcagaggatgggtacatggtagtcataaagggatggacatggtcagaaacaatgctcatgtaggctgtggcatttaaacaatgcccaattggtactaaggggcctaaaatgtgccaagaaaacattccccataccattacaccaccaccaccagcctgcccagtggtaacaaagcatgatggatccatgttctcattctgtttaagccaaattctgactctaccatctgaatgtctcaacagaaatcgagactcatcagaccaggcaacatctttacagtcttcaactgtccaattttgctgagctcatgcaaattgtagcctcattttcctattttcagtggagatgagtggtacccggtgtgggtcttct

Function

NR:

description
PREDICTED: uncharacterized protein LOC103376870

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU84485 True 521 lncRNA 0.44 1 19746949 19747469

Neighbor

gene id symbol gene type direction distance location
spaw NA coding upstream 199663 19544329 ~ 19547286 (+)
dguok LOC104941578,LOC108234509,LOC102204634,LOC103375338 coding upstream 202684 19540250 ~ 19544265 (+)
tcn2 NA coding upstream 206915 19536302 ~ 19540034 (+)
si:ch211-102c2.8 NA coding upstream 214626 19518176 ~ 19532323 (+)
osbp2b LOC104966002,LOC107394196,LOC103353525 coding upstream 242405 19454248 ~ 19504544 (+)
sftpbb sftpb coding downstream 1732 19749201 ~ 19753977 (+)
selenom selenom,LOC100701119,LOC101070319,LOC101478641 coding downstream 52653 19800122 ~ 19806542 (+)
mthfd2 mthfd2,LOC103363193 coding downstream 135741 19883210 ~ 19887470 (+)
arl6ip4 arl6ip4,LOC102787162 coding downstream 141781 19889250 ~ 19891659 (+)
mtrfr clg12h12orf65,LOC102787453,LOC102198566,LOC102302482,LOC104962307 coding downstream 194004 19941473 ~ 19942849 (+)
G63068 LOC103148513,LOC106959092,LOC106925485,LOC102232144 non-coding upstream 29474 19716498 ~ 19717475 (+)
G63029 NA non-coding upstream 90453 19656232 ~ 19656496 (+)
G63015 LOC107394186,LOC104941583 non-coding upstream 113307 19575561 ~ 19633642 (+)
G63016 NA non-coding upstream 162476 19581972 ~ 19584473 (+)
G63007 NA non-coding upstream 184599 19555383 ~ 19562350 (+)
G63087 NA non-coding downstream 33496 19780965 ~ 19832327 (+)
G63128 NA non-coding downstream 125632 19873101 ~ 19875144 (+)
G63189 NA non-coding downstream 267535 20015004 ~ 20015249 (+)
G63190 NA non-coding downstream 268763 20016232 ~ 20016661 (+)
G63192 NA non-coding downstream 270648 20018117 ~ 20018412 (+)
rasl10a rasl10a other upstream 297999 19430401 ~ 19448950 (+)
tmem119a LOC103353570,LOC104946818 other upstream 665295 19076561 ~ 19081654 (+)
mvk mvk,LOC102798305 other upstream 1004550 18737518 ~ 18742399 (+)
acacb acacb other upstream 1061486 18661157 ~ 18685463 (+)
tpcn1 tpcn1 other upstream 1272218 18441347 ~ 18474731 (+)
c6h2orf68 c21h2orf68,c9h2orf68,LOC104941594,LOC103363183,LOC104920309 other downstream 12127 19759596 ~ 19763524 (+)
vps13a vps13a other downstream 653478 20400947 ~ 20442093 (+)
wdr31 wdr31,LOC102796061 other downstream 726182 20473651 ~ 20490586 (+)
G63480 rbm19 other downstream 928948 20676417 ~ 20677916 (+)
LOC120560787 NA other downstream 1841407 21588876 ~ 21599289 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
striped catfish (Pangasianodon hypophthalmus) G133842 NA non-coding NC_047602.1 CM018548.1 16330580 ~ 16362249 (+)
mexican tetra (Astyanax mexicanus) G117071 NA non-coding NC_035909.1 CM008312.1 39839012 ~ 39847835 (+)