mvk (mvk,LOC102798305)


Basic Information

Item Value
gene id mvk
gene name mvk,LOC102798305
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 18737518 ~ 18742399 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU83952
TGTTTGTAACATGTTTGTAAAATGCTTCGTTGAGGATCCTCTGTTGCTCTGATGCTTTGTTAAGCTCTCTTTTATTGTCGAGTCTTCATGAAAAACGTAGAGCTGTGAGACAGATTTGTCAATTGCTGGTTAGTGCTTCAGAGGATTAACATTAGCTAAAGGTGGCAAAGCAAGCTAATAATAACTGTCAGTCACAAGTTGAACTTAAAGCTGCCCAGTTGTGGACAGATCTTTACACTCTGGGAACTGTTACCGAAATGCAACTCAAGGACGTATTCGTGTCTGCTCCAGGGAAGGCGATCCTCCACGGAGAGCATGCGGTTGTGCACGGAAAGGTAAGAGGGAAGAGACGAAACGTCTGGATGCGGAACTTATAAGAAGACTGCGTGAATTTATTGGTGTCACCAATGGAAACTTGGACACTTGCAACATGGCCATCCTAGCCTTCCTCTACATCTACCTCTCACTGTTTGGATCAGGTGAGCTGCCCAGCTTGTCGGTGACTGTGTGGTCGGAGCTGCCGACTGGAACAGGACTGGGGTCAAGTGCTGCCTACTCCGTGTGtttagctgctgctctgctctgtGCAAGTGGAACTATCCCCACTCCTCTCAAAGAGGGGGATAACACTGCCAGGTG
>XM_039803155.1
GCCAAACCTATATCCCTCCTCAGTGTCTCCAGTCTGTGTTTGTAACATGTTTGTAAAATGCTTCGTTGAGGATCCTCTGTTGCTCTGATGCTTTGTTAAGCTCTCTTTTATTGTCGAGTCTTCATGAAAAACGTAGAGCTGTGAGACAGATTTGTCAATTGCTGGTTAGTGCTTCAGAGGATTAACATTAGCTAAAGGTGGCAAAGCAAGCTAATAATAACTGTCAGTCACAAGTTGAACTTAAAGCTGCCCAGTTGTGGACAGATCTTTACACTCTGGGAACTGTTACCGAAATGCAACTCAAGGACGTATTCGTGTCTGCTCCAGGGAAGGCGATCCTCCACGGAGAGCATGCGGTTGTGCACGGAAAGGTGGCTCTTGCTGTGAGTTTGAACATGAGAAcctatttacatttaaaaggcAACACTACTGGCAATGTTTGCATCAACCTCCCAAATATTGACACATTCCTCTGCTGGAACCTAGCTGAACTGAAGCAGCTTATTGCTTATTACTGTGGTAAGAGGGAAGAGACGAAACGTCTGGATGCGGAACTTATAAGAAGACTGCGTGAATTTATTGGTGTCACCAATGGAAACTTGGACACTTGCAACATGGCCATCCTAGCCTTCCTCTACATCTACCTCTCACTGTTTGGATCAGGTGAGCTGCCCAGCTTGTCGGTGACTGTGTGGTCGGAGCTGCCGACTGGAACAGGACTGGGGTCAAGTGCTGCCTACTCCGTGTGtttagctgctgctctgctctgtGCAAGTGGAACTATCCCCACTCCTCTCAAAGAGGGGGATAACACTGCCAGGTGA

Function

symbol description
mvk Predicted to enable mevalonate kinase activity. Predicted to be involved in cholesterol biosynthetic process and isopentenyl diphosphate biosynthetic process, mevalonate pathway. Predicted to act upstream of or within isoprenoid biosynthetic process; phosphorylation; and sterol metabolic process. Predicted to be located in cytoplasm. Predicted to be active in cytosol. Is expressed in liver. Human ortholog(s) of this gene implicated in lipid metabolism disorder; mevalonic aciduria; and porokeratosis. Orthologous to human MVK (mevalonate kinase).

NR:

description
mevalonate kinase-like

GO: NA

KEGG:

id description
K00869 E2.7.1.36, MVK, mvaK1; mevalonate kinase

RNA

RNA id representative length rna type GC content exon number start site end site
TU83952 False 639 lncRNA 0.48 3 18737554 18742398
XM_039803155.1 True 824 mRNA 0.47 4 18737518 18742399

Neighbor

gene id symbol gene type direction distance location
aldh3b2 LOC103470338,LOC103357480,LOC106944551,LOC103142889,LOC106918406,LOC107097252,LOC101157544,LOC100709454,LOC102306236,LOC104945033,LOC105926931,LOC108234466 coding upstream 1043 18730216 ~ 18736475 (+)
ube3b ube3b coding upstream 7578 18720734 ~ 18729940 (+)
myo1ha myo1h,LOC104945027,LOC102796924 coding upstream 22208 18704132 ~ 18715310 (+)
p2rx2 p2rx2 coding upstream 95081 18637694 ~ 18642437 (+)
si:dkey-98f17.5 LOC103357465,LOC102303189,LOC102202618,LOC102793122,LOC101475617 coding upstream 149803 18574988 ~ 18587715 (+)
fam222a fam222a coding downstream 51851 18794250 ~ 18841202 (+)
LOC120560157 tchp,LOC102799482 coding downstream 129883 18872282 ~ 18878090 (+)
ankrd13a ankrd13a coding downstream 154224 18896623 ~ 18904773 (+)
sgsm1a sgsm1 coding downstream 181916 18924315 ~ 18952142 (+)
gatc gatc coding downstream 211425 18953824 ~ 18961484 (+)
G62667 NA non-coding upstream 100297 18636726 ~ 18637221 (+)
G62656 lztr1 non-coding upstream 119949 18617074 ~ 18617569 (+)
G62613 NA non-coding upstream 206207 18531010 ~ 18531311 (+)
G62560 NA non-coding upstream 235143 18501762 ~ 18502375 (+)
G62559 NA non-coding upstream 237012 18500125 ~ 18500506 (+)
G62732 NA non-coding downstream 5091 18747490 ~ 18748496 (+)
G62741 NA non-coding downstream 30356 18772755 ~ 18773108 (+)
G62755 NA non-coding downstream 122176 18864575 ~ 18864807 (+)
G62796 NA non-coding downstream 223684 18966083 ~ 18982623 (+)
G62836 NA non-coding downstream 342535 19084934 ~ 19086862 (+)
acacb acacb other upstream 52055 18661157 ~ 18685463 (+)
tpcn1 tpcn1 other upstream 262787 18441347 ~ 18474731 (+)
tbx5b tbx5,LOC103470367 other upstream 317928 18407348 ~ 18419590 (+)
G62513 NA other upstream 406288 18330705 ~ 18331230 (+)
setbp1 setbp1,LOC102781608 other upstream 608449 18074768 ~ 18129069 (+)
tmem119a LOC103353570,LOC104946818 other downstream 334162 19076561 ~ 19081654 (+)
rasl10a rasl10a other downstream 688002 19430401 ~ 19448950 (+)
c6h2orf68 c21h2orf68,c9h2orf68,LOC104941594,LOC103363183,LOC104920309 other downstream 1017197 19759596 ~ 19763524 (+)
vps13a vps13a other downstream 1658548 20400947 ~ 20442093 (+)
wdr31 wdr31,LOC102796061 other downstream 1731252 20473651 ~ 20490586 (+)

Expression


Co-expression Network