fam222a (fam222a)


Basic Information

Item Value
gene id fam222a
gene name fam222a
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 18794250 ~ 18841202 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803256.1
CTCGGCAGCTCGGCACAAGGGCAGGACCGCATCCCGGAGCTGCCTGAAGCAGCTAGCTCTTTATTCAGACCTAACCATTGCTTATTTGGTTAATACACCAAAGAGAGTATCTCGGAGCATTGCTATCGAGGTTACTCCACAGCCTCAGCTGGAAATCTGAGTCTGAATCGGGAGGCAAGTCATCTCAGAGAGGCTGCCGACACCACGGAGAAAGTGACGGACGGAGCAGAGCCTCATCACCGGGATTTTACATCGCGTCACTTAAGGATATTCCAGGCAGCTGCTTTGGCCCAGCCAAAGGGTACCTTCACACACTATTGCTTAGATAATATTACTAACATTCGCATGATACATTTCACCTAAGGTCGTCTATAGTGAGCAGGCGGACCACATTAAACCCATGCGTAACAGCGGTGGATTTGGGAATACTGCGTAGCAGTTCAACCATCCAGTCTTTCGATTGTCACTTCTGTTATTTGGAGGTATTTACAAGCGAAAGGAAGAGCAACCAGGACCTTTTACTTTGTTCCGGAGGCTAAACCTTGAAAACCCGAAGCGCACTTGGTGCGCAATCCTTCCGAAGACGCTCCTGAAATTGCCGACCTGCGCTTTTGCCCTCGCCAAAAATTGGCAGTCAAATCGAGAGAAAAGGCAAATCTTATTAACTTCGCATGCTAGAGGCTAGTGTGGAATCTAATTCGCACGGCTACCGGTATATTTGCATACAATTGGAAGAGGAGGATAAACTTAATCAACATTTGACATCGACTTAAGCGGCTGCTGGATTTTGGAGAACAGAATGAATCCTTTTTAATTTGGACCACAGAAGTATGAGGCAGATTGCTCAGTGAATGCTACAATCTGCATGGAGTTCTAGTCTGCACTACGGAGCAATTTAtgGTTTGCCGCAGAACTCCCCCGGCTATAGTACTGTGCCCACCTCGCCATGCTGGCCTGTCTGCAGAGGAGGCAAAACCCTCCACCCCAGCACCCGGTGTGTGCCAGCAAGACCCTGGAGCCCCCGCAAGCCCTTGGACGGAAATGTGAGCTGGTGGTGCCCACACATTCCCCACGCTACCCCACTGCAGCAGAACTTAATGCTTTCGCTCAGAAAACGGCCAACAGCCCTCTGTCCATCAAGATCTTCCCCACCAACATCAGGGTTCCTCAGCACAAGCACCTTAATCGGACTGTGAATGGATTTGACACCACAGGGCAACGCTACAGTCCCTATACCCACACAGGGGGCAACCAGGGCCTGCTCGCTATCGTCAAgacctcctcatcatcatcattatcaacAGCCACCTTTGGCCCTTCAAAAGGTGTTCTCAAGAACTCCGAAGGCAGACGGACTAAGCTCTCTCCAGCCCACATAGCTGTCGCCCCATACCCTCCCCCTAGTAGTAGCACTTTAGCCAGTGGCCGCGGCCAAATGGTATACCACACTGGGCCATCAAAGCCTCCAGAAGGCCCCGTACTGTCAGTTCCCCCAAATGTCACTGTAGCTGGCTCAGTGATTCCTGTAACAGGGGGCCGAGGCTTGGCCCTGCCCGCACAGTCCAACCTCCCCTCCATCCAGAGCATCATCTACCAGATCAACCAGCATTGCCAGGCCCAGGCTCTGCAGCAGGTGTGCCAGGGGGCTGCCGCTGCACCGTCAAATTCCAGCCCCTCCAAGCAGGGCACAACTGTCATGGGGGTCTCATCTAGCTCCTCAGGAGGAGGCTACGTAGTAGGAATGGGTTCCCAGGCTAATATGGTATACACAGGGCCTGGGCTGTCGGCTCAAAATGCAGAGGCAATGAAGTCTGGTGTGTACGCAGATAGTATGGACTACATTCTTTGgcagaagcagcagcaacaacaacagcagcagcagcagcagcagcagcagcatcatcatcaacagGCTGTGCTCCGCATGTACAGCGGAGGTAGCGGAGGAGGGGGCGCCATCAGCAAGTCCCCTGAAACTTGTGTTCCGGGGGGAGGGATTATGGCGGCACAAatgtcctcctcttcctccagacCTTACCACCTGACAGCGAGTGCCAGCGGAGGAGGCGGGATGGACAAAGTCAGCTCATCCCCTTTGAACTGTGTGGGTATGCATGGAAATTTCTCAGTGGGTCAATACTTTGCCCCTCCGTGGAACAGTGTGTTGGTGACACCTGACAGTGACTGCTACAATCCCCAGGAGCTTTTGGCCACCTCCACAGGAGGGCCGGTCACGGGGCACAGAGAGATGGGCTACccccaccaccatcaccactaccaccatcatcatcaccctGCTATAGACAGTGGGGGAGGCTTATGCTGCAGCCTGCCCAGCAAGAGCTTGTGCAACACATCAGTGCTGAGCAGCAGCTTGCAGTCTCTGGAGTACCTGATCAACGAAATCCACCCACCCTGCATCAAGGAGCAGATGCTTGGCAAAGGCTACGAGACTGTGTCTGTGCCACGTCTGTTAGACCACCAGCATGCACACATCCGCCTCCCTGTTTACAGATAGAGGGGGAagtagaggaggaagagaatcAAGAGTTTTGAATTTGTGAAGAAAATCAAAGTTAAAGaacagagatgtttttttatgggAACAGATTGTTGTGAGTGGCACTGCTTTAACTAGTGTGGGAGCTTATAGAAGAGCGGTTGTTGTGCTATGTGACCCTAGGTTTGGTGGTTTCAAGGCACGCTGTGGCAATCCCCATATGAAAGGTGGTAGTGATTGCCAATGGGAGAGAAAAAGGGATTTCAAGATTCTCCAGATGTTCCATTGTGTGGTTTGCAAATAGGAATTTtggattgatttattttttcttcgttttttttttttttttgctgttgttttaCTTGCCTGAACTTAGTGAGGAGAATTATAACTTGACATGAAGTGCATATGGCACTTGTATCCACCTTCCAAATACTAAGGATGAAGCTACTGTGTAGGTTGTCACTGAAAGGGTCTTAAAAGGGCCGACGTTTAGGGCTGctttcaaaatccaaaactCTGTAAcaatacacaaataaacacacacatagacaaacacatacagatacacaatGTATACACAATAATACTCGGGTGTGTATGTACAAGGATCATAAGGTTGAATTAAAAGGATAGTACAATATTAGTTATGATTGCTGTTATAATTGATACATAAATTGCACTGCTTGAATCTTGTTAACTTTGAAGTTTGGAATTGGGTAGATTGGATATGATATATTTAAGAAACTTGAAAAACTTGAacctattttttgttgttttatatatttgtagGTATATTATATGCATTGGCTGCTATGGGGAAAAGTTTCTCAAatgcttttttcattttttttttccacttttgtttttatgattTACTAATTCCTCCTCAAGCTGATGTGCAGTTTCTTATGTCCTGGTGTGAGGCATAGTCGCTGCTTTGGTTCTGTAAGAACCTGGTCGGAGAGCTCTTTTTCCTAACCAACACTGGAATCTACAATAAATCTTGAAatacttatttaaaaaagaaaatgtcgcaaaaaaaaacaaccatgaAAAAGAAATGTTACAATGAAGAATGTGATTGGGaggttatttacataaccttacaTGTATGTTTATGCGTGTATGTGGCTGGGTGCATGCGCGTGTGTGCATTTTAGTTTGTGTTTATCAAAATcctcagacttttttttttgtaattgtgtCATTATAAGAATACTACCATCAAGACTGAAAAACTGATTAACCAGTCCCATCAACATCATATCTGAGTAATGTACAGGAGATATTTTGCAAATCTCGCTCCCTTTTCTCAGAGGCTTTAGATATTCTCTGGAGCTAGAGTAGAGATCAAGTTCTCACGTGACTCCTTTCTACCTGTAGTTACAGTGCTACATCCCTTCTGTCAAATGTTATCATTATGACAGAAAGACATGGGGACAAACGGAAGTTTGGGGGTACTATTCACCTCTGATCCTGCAAACATACAAAATGGAAACAATCATGCCCTGTCCTCTGGTATCAGATGAAATGAGACGAGGCTCACTGCTTTGCCTTGTCCTTTTCAGCCCCTGGTTGGGATACATTTAGCCAGGGCCAGTCTTAAATCGATGATTCAGAGCAGTGAAATATTTATTATGACTGTGAGATTCTCTTGAATGTACTGCACTTAAATTACTGCGATGTTTTATTGCCTTGTGGGACCcaagtgaaagagaaaaattGGATCAGTGCAGCAGTCCTCTGGTCTTAAATTAGCATTTCTTTTGTCCGTCAAATTTCAATGGTAAATTGAATTTAGTAACTGGAGAGAAGGAGCCGGAGCTTTGTTGTGGGGAAATACTGGCATCAGTCTAGATTTATGAAGTGCAATTATTATGACTGTATTAACATTTTTCTCTGAGCTTAcaccaaaaaaatgtaaactacaGTTGTCAATACATTCCCAATGTACCACATCCCTAATCCctatcctttttttgttttgaggtGTAAAATAAATTTCTTTAAGAATATA

Function

symbol description
fam222a Is expressed in several structures, including margin; nervous system; neural tube; periderm; and tail bud. Orthologous to human FAM222A (family with sequence similarity 222 member A).

NR:

description
PREDICTED: protein FAM222A isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803256.1 True 4520 mRNA 0.46 3 18794250 18841202

Neighbor

gene id symbol gene type direction distance location
aldh3b2 LOC103470338,LOC103357480,LOC106944551,LOC103142889,LOC106918406,LOC107097252,LOC101157544,LOC100709454,LOC102306236,LOC104945033,LOC105926931,LOC108234466 coding upstream 57775 18730216 ~ 18736475 (+)
ube3b ube3b coding upstream 64310 18720734 ~ 18729940 (+)
myo1ha myo1h,LOC104945027,LOC102796924 coding upstream 78940 18704132 ~ 18715310 (+)
p2rx2 p2rx2 coding upstream 151813 18637694 ~ 18642437 (+)
si:dkey-98f17.5 LOC103357465,LOC102303189,LOC102202618,LOC102793122,LOC101475617 coding upstream 206535 18574988 ~ 18587715 (+)
LOC120560157 tchp,LOC102799482 coding downstream 31080 18872282 ~ 18878090 (+)
ankrd13a ankrd13a coding downstream 55421 18896623 ~ 18904773 (+)
sgsm1a sgsm1 coding downstream 83113 18924315 ~ 18952142 (+)
gatc gatc coding downstream 112622 18953824 ~ 18961484 (+)
LOC120560962 NA coding downstream 116804 18958006 ~ 18958978 (+)
G62741 NA non-coding upstream 21142 18772755 ~ 18773108 (+)
G62732 NA non-coding upstream 45754 18747490 ~ 18748496 (+)
G62667 NA non-coding upstream 157029 18636726 ~ 18637221 (+)
G62656 lztr1 non-coding upstream 176681 18617074 ~ 18617569 (+)
G62613 NA non-coding upstream 262939 18531010 ~ 18531311 (+)
G62755 NA non-coding downstream 23373 18864575 ~ 18864807 (+)
G62796 NA non-coding downstream 124881 18966083 ~ 18982623 (+)
G62836 NA non-coding downstream 243732 19084934 ~ 19086862 (+)
LOC120560789 NA non-coding downstream 310331 19151533 ~ 19153584 (+)
G63005 LOC104920315,LOC103374896,LOC100704901 non-coding downstream 708208 19549410 ~ 19554906 (+)
mvk mvk,LOC102798305 other upstream 51851 18737518 ~ 18742399 (+)
acacb acacb other upstream 108787 18661157 ~ 18685463 (+)
tpcn1 tpcn1 other upstream 319519 18441347 ~ 18474731 (+)
tbx5b tbx5,LOC103470367 other upstream 374660 18407348 ~ 18419590 (+)
G62513 NA other upstream 463020 18330705 ~ 18331230 (+)
tmem119a LOC103353570,LOC104946818 other downstream 235359 19076561 ~ 19081654 (+)
rasl10a rasl10a other downstream 589199 19430401 ~ 19448950 (+)
c6h2orf68 c21h2orf68,c9h2orf68,LOC104941594,LOC103363183,LOC104920309 other downstream 918394 19759596 ~ 19763524 (+)
vps13a vps13a other downstream 1559745 20400947 ~ 20442093 (+)
wdr31 wdr31,LOC102796061 other downstream 1632449 20473651 ~ 20490586 (+)

Expression


Co-expression Network